| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3199 |
|---|
| Symbol | |
|---|
| ID | 4174976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3841002 |
|---|
| End bp | 3841895 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638056230 |
|---|
| Product | UTP-glucose-1-phosphate uridylyltransferase |
|---|
| Protein accession | YP_662759 |
|---|
| Protein GI | 109899504 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1210] UDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG TAAAGAAAGC CGTTATTCCA GTAGCAGGTC TTGGAACGCG TATGTTGCCA
GCAACCAAGG CGATCCCAAA GGAAATGCTA CCAGTTGTTG ATAAGCCACT TATCCAATAC
GTTGTATCCG AATGTGTGAA TGCAGGCATA AAAGAGATTA TCTTAGTGAC TCATGCGAGT
AAAAACAGCA TCGAGAACCA TTTTGATACC AGTTTTGAGC TTGAAGCCAC GCTAGAAAAG
CGTGTTAAAC GTCAACTATT GGAAGCGGTT CAAGCAATCT GCCCCAAAGA CGTTACCATC
ATGCACGTAC GCCAAGGTGT CGCTAAAGGC TTGGGTCACG CAGTATTGTG TGCTCGCCCT
ATGGTTGGTG ATGCGCCTTT CGCAGTGGTT CTACCTGACG TTATTGTTGA TGAAGGTACA
TGTAATCCTA AGAAGGATAA CTTGGCAGAC ATGACGGCTA AATTTAATAC CAGTCAAGTC
AGCCAAATCA TGGTGGAAAG TGTTCCTCAA GAAGATGTTA GCAAGTACGG TATCGTTGAT
TTAGACGGTG CAGAACTGTC ACCTGGTGAA TCAGCGAAGA TGCACGGTAT GGTAGAAAAA
CCTAACCTAT CAGATGCGCC ATCAGATTTA GCTGTTGTTG GACGTTATGT ATTGTCTGAA
AAAATCTGGG ATCTTCTCGC TAAAACCACG CCTGGTGCAG GTGATGAAAT TCAGCTAACA
GATGCTATCG ATTCTTTGAT GCAAACCGAG CAAGTTGATG CTTATTACAT GAAAGGCAAA
AGCCATGATT GTGGCAGCAA GTTAGGCTAC ATGAAGGCGA ACGTTGAATA TGCGATGCGC
CACCCCGAAT TAGGTGCTGA GTTTAATGAG TTTTTACAGA CGCTTGTGAA ATAA
|
|---|
| Protein sequence | MSQVKKAVIP VAGLGTRMLP ATKAIPKEML PVVDKPLIQY VVSECVNAGI KEIILVTHAS
KNSIENHFDT SFELEATLEK RVKRQLLEAV QAICPKDVTI MHVRQGVAKG LGHAVLCARP
MVGDAPFAVV LPDVIVDEGT CNPKKDNLAD MTAKFNTSQV SQIMVESVPQ EDVSKYGIVD
LDGAELSPGE SAKMHGMVEK PNLSDAPSDL AVVGRYVLSE KIWDLLAKTT PGAGDEIQLT
DAIDSLMQTE QVDAYYMKGK SHDCGSKLGY MKANVEYAMR HPELGAEFNE FLQTLVK
|
|---|
| |