| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3196 |
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| Symbol | |
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| ID | 4174973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3837514 |
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| End bp | 3839271 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056227 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_662756 |
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| Protein GI | 109899501 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGATA GTTTAATTAA ACAGCAGTAT CAGAGCTTAC ATAAGTTGCT GGCGTTCTAT
CGCCGCCCTG CCCCGGAACC AGACTTGGTT CAAAAAACGC TTGATTTCAA TAACGCGTTA
TTAGGATTAG CCAAACAGTA CCCAGATCTT ACCTTCGCAC AAATACATCT TTATAAAGCG
TCGCTACCGC GTCATTACAA TTTAGCCTTC AGCGCTAGTT TGATGACAGC GCTGTTGTGC
GTGCGCAATC GATTTAACGA AACAACCACG ATTCAACTCA TGAGCGCAGC CTTAAGTATT
TTTGGGTTAG CTGAAGAAGC ATCTAATGTT GACCAAAGTG AGCAGTCCGG CTTAGCAAAA
GTGACACATC ATGAACCACT GGCCAAAATA TCCCCTGATA CAGCATTCTG TCGCATATTA
ACCCAGTACC AACAAGGCGT GTGGTTACAA GGATATCGCC ACGGTTTGTG GCTCAATAAA
ACCTTCAGAG AACACCTTAA CTGGTTACAG CACGAGAGCA TCGACACATC TGCCTTGGCC
TTGGCAATCC GACTAACTTT GATGATGCAC AATCCACAAA ATAAGACGAA ACAGAGCTTT
CAAAGCGCCC TTGCATTAGT TGTTCAAAAT TCGCCAAGTG CGCAAGCACA GTTATTAGAG
CCGCTGATGG CATACCCAAG TGCTACACCG CCTGGCACTT ATGTCATGTT AGATGATGAC
TCACTGGCTT TAGTTATCGG CATCGCAGGT GATAAATTGC TTTGTTATCC ACAAAGCACA
TCCCGACATA CATCGATGCA CTCCTCTCAC TTTACTGTTG ACAGGGTTCG CGTCAAACAC
GCTTACCCAG CGCAAGCAAT AAAGAAACTC AGTAATCTCA CAACTTGGTG GGGAAATAAT
TGGCAGTTAT TTGAGCAAGA GTCGAGCACG AAAGCAGAGT CGCCATTTAT GCAAAGTTTT
AAAATGAGCC GCCCCCCTGC AACCTTAACA GCAATACAAA GCCAGCTAAA TAAACCGATT
CAAGATATCA ACAAATTGAG CTTAGCCATT GCACGGGAGC CTTCATTTGC CCAGCACTTA
CGTAAGACCG CATCCCAAAG TAGTCGACAA AAACTTCCTA TTAAAGACAT TCAGCACGGC
TTGATGATGC ATGGATTCGA GCGCTCTGGC AGCATTATTA TGCAACAGGC GCTGCTAAGT
AGATTAAACC AACACCATTT CCCTTTGCAA CGAGCGTTTA TTAGCTTCGT ACAGTTACGC
GGCCACATTG CAGCGAGCTT AGCGAAAATA GGAAATATTG GCATTCCCGA ACAAGCGTGC
ACCTTGGCAT ATTTTGCCTG CGTCGGCTTA TTTACCCATG TTCAACTAAA AATTCAAACC
CAATGGCAAA AAAGTAACCG TACTAGCTAT GATATGACGA CATTAGTGCG CTGCATAAAG
CCGGAACAGC TACGCAGTCA TGCAGTGTCC ATGGCTGAAG CTTGGCAGCA GCGGCGTCAC
GAGATTGTCG CATTGAATAA TTACCACGAT GCGAATTACC TAACCGAGAA TAAGCGAAGC
CCTCAGGTCG AATTGGCTGC TATTTTGGGG ATCAGCTTGA TGCTGGCGAG AGAACTTTAT
TTTAGTGATG CCAAACGATG TGTGCAAAGC CAACAATATT GTAATAGCGC CTGTAAAGCC
TTACGTATAA ATGTGCAAGA ATTAGCGCTT ATCAAATCTG AAGCCTATGC CATCTGTCAT
AGTTTTTCAC CGTTGTAA
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| Protein sequence | MPDSLIKQQY QSLHKLLAFY RRPAPEPDLV QKTLDFNNAL LGLAKQYPDL TFAQIHLYKA
SLPRHYNLAF SASLMTALLC VRNRFNETTT IQLMSAALSI FGLAEEASNV DQSEQSGLAK
VTHHEPLAKI SPDTAFCRIL TQYQQGVWLQ GYRHGLWLNK TFREHLNWLQ HESIDTSALA
LAIRLTLMMH NPQNKTKQSF QSALALVVQN SPSAQAQLLE PLMAYPSATP PGTYVMLDDD
SLALVIGIAG DKLLCYPQST SRHTSMHSSH FTVDRVRVKH AYPAQAIKKL SNLTTWWGNN
WQLFEQESST KAESPFMQSF KMSRPPATLT AIQSQLNKPI QDINKLSLAI AREPSFAQHL
RKTASQSSRQ KLPIKDIQHG LMMHGFERSG SIIMQQALLS RLNQHHFPLQ RAFISFVQLR
GHIAASLAKI GNIGIPEQAC TLAYFACVGL FTHVQLKIQT QWQKSNRTSY DMTTLVRCIK
PEQLRSHAVS MAEAWQQRRH EIVALNNYHD ANYLTENKRS PQVELAAILG ISLMLARELY
FSDAKRCVQS QQYCNSACKA LRINVQELAL IKSEAYAICH SFSPL
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