Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3134 |
Symbol | |
ID | 4174907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3775742 |
End bp | 3778108 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056161 |
Product | ATP-dependent protease La |
Protein accession | YP_662694 |
Protein GI | 109899439 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000324341 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAG AGAATGTTGA TTACACAGAA ATGCCGGTCT TGGCATTGCG TGATGTGGTG GTTTATCCGC ATATGGTTAT TCCCTTATTT GTCGGTCGCG AGAAGTCGAT ACGTTGCTTA GAAGCTGCGA TGGATAAAGA CAAACAAATA TTTTTAGTCG CGCAAAAAGA CGCCAGTACC GATGAGCCAC AGCCTGATGA TATTTTTACT GTCGGCACCA TAGCGACCAT TTTGCAGCTG TTAAAGTTAC CAGACGGCAC AGTGAAAGTG TTGGTTGAAG GTAATCAGCG TGCTCAAATT GCTGAATTTG TTAGCACCGA TGATTTTTTC ATCGCAAATA TTTCGAATAA AGACGACCTT GAAGTCGAAG AGAATGAGCA AGAAGTCATT ATTCGCTCAG CGATTTCTCA GTTTGAAGGG TATGTAAAAC TTAATAAAAA GATCCCACCT GAAGTACTGA CTTCGTTAAG CGGGATTGAG CAAGCTGCTC GCCTAGCCGA TACCATGGCA GCGCATATGC CCCTTAAATT AGCTGAAAAG CAAAAAGTAT TAGAAATGGA TCAAGTTAAC GATCGTCTTG AATACTTGAT GGCATTGATG GAAAGTGAAA TAGATTTGCT GCAGGTCGAG AAAAAAATTC GTACCCGCGT TAAAAAACAG ATGGAGAAGA GTCAGCGCGA GTATTATTTG AATGAGCAAA TGAAAGCCAT CCAAAAAGAA CTCGGTGAAC TAGACGAAGC GCCTGACGAA TTTGAAGCGC TAAGCAAAAA AATCGACGAC GCTAAGATGC CAGAAGAAGC TAAGAAAAAA GCAACGACCG AACTTAGCAA ATTAAAAATG ATGTCACCTA TGTCTGCCGA AGCCACCGTG GTGCGTAGCT ACATCGATTG GCTAACCAAT GTGCCTTGGA CTAAACGCAG TGCAGTGAAG AAAGATTTAG CTGCCGCTGA TAAGTTGCTT GATACGGAGC ACTACGGGCT TGAAAAGGTC AAAGAACGTA TTATTGAGTA TCTAGCAGTT CAACAACGCG TTAGAAAGCT CAAAGGACCA ATATTATGCT TAGTGGGCCC TCCAGGGGTG GGTAAAACCT CACTGGGCCA GTCTATTGCC AAAGCAACAG GTCGCAAATA CGTGCGCATG GCGTTAGGCG GTGTTCGTGA TGAAGCAGAA ATACGCGGCC ACAGACGTAC TTACATCGGC TCTATGCCGG GTAAGTTGAT CCAGAAAATG GCAAAAGTGG GGGTGAAAAA TCCACTGTTT TTACTTGATG AAATCGACAA AATGTCTTCT GACATGCGTG GAGATCCATC TTCAGCGTTA TTAGAAGTGC TTGACCCTGA GCAAAACAGC ACGTTTAGTG ATCACTACTT AGAAGTTGAT TATGATCTGT CTGACGTCAT GTTTGTTGCT ACGTCGAACA GTATGGACAT TCCCGGACCG TTGTTGGACA GAATGGAAGT GATTCGTTTA TCTGGCTACA CAGAAGATGA AAAACTAAAC ATCGCCACAC GCCACTTACT TGAGAAACAA ATCAGTCGTA ATGGTTTGAA GAGCAAAGAG TTAGTGATCG AAGAGTCCGC GATCATTGGT ATGATCCGTC ACTACACGCG TGAAGCGGGT GTGCGTAGCT TAGAGCGGGA AATATCCAAA GTGTGCCGCA AAGCGGTGAA AAATATTTTG CTCAACAAAG ACATAAAGTC CGTCACTGTC TCTCAAGATA ATCTGTCTGA ATATCTAGGT GTGCAACGCT TTGATTACGG AAAGGCAGAA AACAATAACC AGATTGGCCA AGTAACAGGG TTGGCTTGGA CTCAGGTCGG TGGGGAGCTG TTGACCATTG AGGCGACATC GGTCGTGGGC AAAGGCAAGA TGACCTCAAC GGGCTCGTTG GGTGATGTCA TGCAAGAGTC GATACAAACG GCGATGACGG TGGTGCGTAG TCGAGCTGAA AAGCTGCGTA TCAACAGTGA TTTTCATGAG AAGCGTGACA TTCACGTGCA CGTACCTGAA GGGGCAACCC CTAAAGATGG GCCGAGTGCT GGTATTGGCA TGTGCACGGC ATTGATTTCT GCACTTACGG GCAATCCTGT GCGCTGTGAT GTGGCCATGA CAGGTGAAAT TACTTTACGG GGCGAAGTGC TTGCAATTGG CGGTTTGAAA GAGAAACTGC TGGCAGCACA CAGAGGCGGA ATAAAAACGG TTATCATTCC GAAAGAGAAC GAACGCGATT TACAAGAGAT CCCAGATAAT GTAAAACAAG ACCTGTCAAT TCATCCTGTG CGCTGGATTG ATGATGTTTT AGAGCTGGCA TTACAAGAAA ATCCCGAGCG TTTTAGCCTT GAAAAGCCAA GCAAGGGTAA AAAATAG
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Protein sequence | MTKENVDYTE MPVLALRDVV VYPHMVIPLF VGREKSIRCL EAAMDKDKQI FLVAQKDAST DEPQPDDIFT VGTIATILQL LKLPDGTVKV LVEGNQRAQI AEFVSTDDFF IANISNKDDL EVEENEQEVI IRSAISQFEG YVKLNKKIPP EVLTSLSGIE QAARLADTMA AHMPLKLAEK QKVLEMDQVN DRLEYLMALM ESEIDLLQVE KKIRTRVKKQ MEKSQREYYL NEQMKAIQKE LGELDEAPDE FEALSKKIDD AKMPEEAKKK ATTELSKLKM MSPMSAEATV VRSYIDWLTN VPWTKRSAVK KDLAAADKLL DTEHYGLEKV KERIIEYLAV QQRVRKLKGP ILCLVGPPGV GKTSLGQSIA KATGRKYVRM ALGGVRDEAE IRGHRRTYIG SMPGKLIQKM AKVGVKNPLF LLDEIDKMSS DMRGDPSSAL LEVLDPEQNS TFSDHYLEVD YDLSDVMFVA TSNSMDIPGP LLDRMEVIRL SGYTEDEKLN IATRHLLEKQ ISRNGLKSKE LVIEESAIIG MIRHYTREAG VRSLEREISK VCRKAVKNIL LNKDIKSVTV SQDNLSEYLG VQRFDYGKAE NNNQIGQVTG LAWTQVGGEL LTIEATSVVG KGKMTSTGSL GDVMQESIQT AMTVVRSRAE KLRINSDFHE KRDIHVHVPE GATPKDGPSA GIGMCTALIS ALTGNPVRCD VAMTGEITLR GEVLAIGGLK EKLLAAHRGG IKTVIIPKEN ERDLQEIPDN VKQDLSIHPV RWIDDVLELA LQENPERFSL EKPSKGKK
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