| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3132 |
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| Symbol | |
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| ID | 4174905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3773178 |
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| End bp | 3775061 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056159 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_662692 |
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| Protein GI | 109899437 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000394697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGAAA GAATCAGAGA GGGAACCCAG GGCACTTGGG CCATGGCTAT CCTAGGATTG
GTGATTTTAA GTTTTGTATT TGCCGGTGTC GGTAGCTATA TCAATTCTTC TGCCGAAACT
GCGGCAGCTA AAGTTAACGA TGACACTATT TCTCAAGCCG ACTTAGAACG CGCCTATCAA
AACGAACGCG GACGCATGGA GTCACAATAC GGTGAAGCAT TTGCTGCATT GACCGCCGAT
AGTGCTTATT TGCAACAATT TAGGCAGGGT GTTTTAGACC GTTTAATCGG CGACAAACTT
CTTGAGCAAG CAGCCATTGA TATGGGCTTA CGCGTCAGCG ATGCACAAAT CAAGCAAGCT
ATTGTCGCAA TGCCAGAGTT TCAATTTGAC GGCAAATTCG ATAATGAGCG TTACACCGCC
GTTTTACGTC AAGCTGGCTT TCAGCCAAAC GAATTTCGCG ATTATATGCG GGTTGACATG
ACTCGTCGTC AACTTTCAAA TGCATTATTA GGCTCAGAGT TCACGCTAGC CGCTGAAACC
ACACAGGCTT ATAAGCTTCA ACAGCAAACG CGAGATGCGC GCTACTTAAC CATACCTGCC
GAATCCTTCA AAGATGGTAT TAACGTATCT GACGATGACG TTGAGAACTA TTATCAAGCC
AACATCACTC AATTTGATAC CGAGCAAAAA GTGAGCTTGG CCTATGTGGA ATTGTCAGTA
GACGACTTAT TAACCGACAT TGTTGTTTCA GATGATGAAG CACTGCAATA CTACGAACAA
AATATACAAG ATTTTAGAAC CCAAGAAGAA CGCCGCGCTT CACACATTCT TATAGAATTC
GGCGATGATG AGCAAGGCGC TCGTCAGCAA GCCGAAGATG TCTTGTCTAA AATTAACGAC
GGTGGTGACT TTGCCGAACT CGCCAAAGAG TATTCTAGTG ATACATTTAG TGCTGAGAAT
GGCGGCGATT TGGATTGGTT TAGTGCAGGT ATGATGGATC CAGCATTTGA AGAAGCGACT
TACGCACTGG CCAATGTTGG TGATGTATCT AGTGTGGTAG AAAGTGAATT TGGTTACCAC
ATCATCAAAC TAACAGACAT AAAGCCTGAA GAGACAAGCC CATTCACCGA CGTGAAAGAA
GACGTGATCG CCAAGCTTAA ATCTGAACGC GCTGAAGAAG AGTTCTATGC CAAGCAATTA
CGCATGGCTG AAGTCGCTTT TGAAACGCCT GATACACTTG ATGAAGTGGC AGCTATCGCT
GAGGTTGATG TCAACACAAC CGTGATGTTT AGCCAAGACA GTGTTCCAGC AGCGGTTAAT
TATCCTAACG TTGTTGCTCA AGCATTCTCT GATGAGCTGA TTAACGATCA AGTAAACAGC
GATGTAATAG AGCTAGGCGA CAATCACGTT ATGTTCGTGC GCGTTGCTAA TTACGAAGCT
CAGCGTACTA AAGCCCTTGA AGAAGTATCA CCTGAAATTA ATGATATTTT ATTGGCTGAG
CAAGCACAGC AAGCAGCTAA AGAGTGGGCC GAAACTTTAT TAGTTGATAT TAAAGCTGAG
CAGGACGTCA GCGAAAGCTT GCAAGCTAAA GCCGTTGAGT GGCAGGAGCA GGAAGCGGTT
GCAAGAAGTG GCTCTCAGAT TTCTCCAGCC TTAGTGACTG CTTTGTTCAA ATTGACTGAG
GACAAAGAAT CAAACGCGCA AGTGGTTGAG CTGTTCAATG GCGATGTCGG TTTAGTTCAG
CTAATGAAAG TTAATGACGG CGCTGAGTTA CCAAGCACTG ACGTAGCAGC GTTGCAAAAT
AGATTATCTA CAATGCGAGC ACAGTTCACC TATGGTGAGT TTGTTAATGC ACTGCGCGAA
CAAGCAGATG TAGAAATTTA CTAA
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| Protein sequence | MLERIREGTQ GTWAMAILGL VILSFVFAGV GSYINSSAET AAAKVNDDTI SQADLERAYQ
NERGRMESQY GEAFAALTAD SAYLQQFRQG VLDRLIGDKL LEQAAIDMGL RVSDAQIKQA
IVAMPEFQFD GKFDNERYTA VLRQAGFQPN EFRDYMRVDM TRRQLSNALL GSEFTLAAET
TQAYKLQQQT RDARYLTIPA ESFKDGINVS DDDVENYYQA NITQFDTEQK VSLAYVELSV
DDLLTDIVVS DDEALQYYEQ NIQDFRTQEE RRASHILIEF GDDEQGARQQ AEDVLSKIND
GGDFAELAKE YSSDTFSAEN GGDLDWFSAG MMDPAFEEAT YALANVGDVS SVVESEFGYH
IIKLTDIKPE ETSPFTDVKE DVIAKLKSER AEEEFYAKQL RMAEVAFETP DTLDEVAAIA
EVDVNTTVMF SQDSVPAAVN YPNVVAQAFS DELINDQVNS DVIELGDNHV MFVRVANYEA
QRTKALEEVS PEINDILLAE QAQQAAKEWA ETLLVDIKAE QDVSESLQAK AVEWQEQEAV
ARSGSQISPA LVTALFKLTE DKESNAQVVE LFNGDVGLVQ LMKVNDGAEL PSTDVAALQN
RLSTMRAQFT YGEFVNALRE QADVEIY
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