| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3121 |
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| Symbol | |
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| ID | 4174894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3761410 |
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| End bp | 3762744 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056148 |
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| Product | exodeoxyribonuclease VII, large subunit |
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| Protein accession | YP_662681 |
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| Protein GI | 109899426 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.698852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGTG CGTCACCCGC AAACCGAAAT ATCTTCACCG TGAGTAAGCT AAATCATCTC
GCTCGCTCGG TTTTAGAATC TGAAATCGGC CAAGTTTGGC TCAGTGCTGA AATATCAAAT
TTCGTTGCTG CCAGCTCAGG ACATTGGTAT TTCACCCTCA AAGACAACCG CGCTCAAATC
AAAAGTGCGA TGTTCAAAGG TGCTAATCGC AAAGTCATGA CTCGCCCGAA AGAAGGCGAC
AAAGTATTGG TACAGGCCAA TTTGAGCATT TATGAGCCAA GAGGAGATTA TCAGCTGATA
GTTGAGCATC TTGAACCTGA AGGTGAAGGT CAACTTAAGC GACAGTTCGA AGCGCTAAAA
CTCGCTCTTT CTGCACAAGG CTTATTTGCT AATGAGAACA AGCAACCATT ACCTGACAGC
ATTAGCCGAA TTGGTGTAGT CACATCTGCG ACAGGTGCGG CGCTACACGA TATTCTCACG
GTATTAAAAC GTCGCAACCC TGCTGTCGAA GTTATTATTT ATCCTACCCA AGTACAAGGT
GCTAACGCCA GTAGGCAAAT TTGCCGATCG ATTGAAATCG CTAATCAGCG TAATGAAGTA
GACATACTTA TTGTCGGGCG CGGCGGCGGC TCGTTAGAAG ATCTATGGTG TTTTAATGAA
GAGAATGTAG CTTGGGCTAT CCATTACAGT GTACTGCCCA TTGTGAGCGC TGTGGGCCAC
GAAGTGGATA TTACTATTGC TGACTTTGTG GCTGATTTAC GCGCCCCTAC CCCATCGGCA
GCAGCGGAAT TAGTCAGTCA GTCACAAATT GAGATGCTAA GCGCATTGAC GGCTAAACGT
GACAGGTTAT ACAAGAACAC CCGTACATTG CTCAAGGAGC TGCACTATCA GCAGCAGTCG
TTGACACAAG AACTCAATAC TTATCACCCT AAAAATCAAC TTCGCCAACA CATGCAGCGG
GTGGATAACC AACTAACCGC TATCACCCAT AATATGACAA CTCGATTAAT GCGCGCCAAG
CAAACCTGCG ATAGCCGTAT CAGCAAATTG TCACAGTTAT CGCCCAAGGC ATTATTGAAA
GAACAACAGA ACACCCACAA CTTGTTGTCA CAGCGTTTAA CTCAAGCGTG GCGCCGCGGC
GTAGAGCAAC GTCATTTAAA GCTCGCTAAT GCCAGCCACC TTCTTGATAC CGTCAGCCCA
CTATCAACAT TGGCTAGAGG GTATAGCATC ACGTTTAAAA ATGACAAAGT AGTGAAAAGC
CAAAAAGATT TAGCAAAGGG CGATGTGATC ACCAATCGCT TTGCTGACGG TGAAACCAAA
AGTACTGTGA ATTAG
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| Protein sequence | MFSASPANRN IFTVSKLNHL ARSVLESEIG QVWLSAEISN FVAASSGHWY FTLKDNRAQI
KSAMFKGANR KVMTRPKEGD KVLVQANLSI YEPRGDYQLI VEHLEPEGEG QLKRQFEALK
LALSAQGLFA NENKQPLPDS ISRIGVVTSA TGAALHDILT VLKRRNPAVE VIIYPTQVQG
ANASRQICRS IEIANQRNEV DILIVGRGGG SLEDLWCFNE ENVAWAIHYS VLPIVSAVGH
EVDITIADFV ADLRAPTPSA AAELVSQSQI EMLSALTAKR DRLYKNTRTL LKELHYQQQS
LTQELNTYHP KNQLRQHMQR VDNQLTAITH NMTTRLMRAK QTCDSRISKL SQLSPKALLK
EQQNTHNLLS QRLTQAWRRG VEQRHLKLAN ASHLLDTVSP LSTLARGYSI TFKNDKVVKS
QKDLAKGDVI TNRFADGETK STVN
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