Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3091 |
Symbol | |
ID | 4174863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3724702 |
End bp | 3726831 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056117 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_662651 |
Protein GI | 109899396 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGAA CGGCAGATTT GCTCTCTATC GCTCGCTCCG GTGTGGAGGC AAGTAATCAA TTACTCAGTA CCACAGGTAA TAATATTGCC AATGTGAACA CCGAAGGATA TGTTCGTGAG CGAACCAACT TCGTAGCTGA GTTAACCGGA GGTGTTGGCC AATTCACCAC TGAGCGAGTG ATGAACACGT TTGCGCAAAA CCAGTTGCGC CGAGACACCA CTAATCTTGC TGAGCATGAA GCTTATTGGA GCAAAACGGC TGTTTTAGAT AATGTTTTCG CCAGCGAAGC AAATAGCATT TCAAGTAGTA TGAGCCGTTT TTTTGCATCT TTGCAAACGG CTAATGATGA TCCGACAAAT ATGTCTGCAC GACAATTAGT GCTGGGCGAT GCCGAGTCAA TGCTTGGCCA GATGGGCACG TTATCGACCT TTTTAGCTGA GAAAGAGCGT GAAGTTAATT TTGAGTTTGA AGCATCGTTG AACAAAGTGA ACTCATTGGT TGAGTCTATT GCTTCATTTA ATGAGTCTAT TCGAATCGCT CAAGCTAATA ATCGTCACGA TGAGCCAGGC GCGCTCATGA ATCAAAGAGA TAATGCGGTG CTGGAATTAA GCAGTCTAGT GTCGATTGAA ACCCGAAATA GTTCAAACAA TGATGGCTCC ATCATGATAA ACCTCACGTC CGGTGAGTCA CTTGTGATGC AAGACGGTAC GTTTAGCGTC TTTGAAGTGA ATAACAGCGC AGACTTAAAT TATAAATCGT TACAGCTGAC GAGTAATGGC AAGCCGACCT CTTTAAATCT AGCCGAAACT GAGCTGGGGG GGACAATTGG CGGGTTATTC CGTTATCGTG ACGAGGTATT GGAGCCTAGT CGCCGAGAGC TAGGGCAAAT TGCTTTGGCG GTCACTGAAG CTGTGAATAC GCAAAACCGG GCGGGTATGG ATTATGACCA GCAATTAGGA GGCGAGATTT TTACACGTCC CATCACCACG GCGCTGAACT ATCCAGGCAA TGCTGATAGC ACTTCTATCG TTAATGGTCG CATTTCAAAA GGCGGTGCCA GTGAAATTAC TAGCGCTGAC TACCGAGTTA CTATTGACGG AGTCACTGCG GGTGTGCCGC CAACTGTGGA TGTCACCGTT GAATTACTGA ACCTAGATGG CTCAGCTGTT ACCGATGTGA ATGGTGCGGC CATTACCCAG AATTATACAG GGTTAACCGC GCAAAGTGGC GAGTATAATG AAATCTTTGG GGGTATCGAG TTAGAGTTTT CAAAAGGCAC TGGTTACACG GTAGGCGATC AGTTCTTATT GCAACCGACC AAAGATGTGG CAGACAAAAT CGAAGTGTTC ACCACACGCC CAGAAGACTT AGCGTTAGCA AGCCCGATTA GAATTGAAGC CGGCGAAGAT AATTTAGGCG GCTCAGAGCT CGTTTCAACA ACAGTGACAA ACACCTTTGT GGACACCGCA CCTTTTGATT CACGCTCATC GGGTTTTGAC GGGGCCGGAG GTATTCATGC GCCTGGCGCT GCGCCCGGTG GTGGAGTCGG TGCACCGGCA GCGGTGCGGT TTAACTCTGC CACTGAATAT GAAGTGCTTG ATAGCGCAGG CACTGTTATC ACCACGGTAA GTGGTATTTC ATCGATGGAT AACCTTTTAG AGCAAGCTTC TGGCACGCCA GGGTGGCCCG CAGCATTTAG TGCACTTGAT AATTACCCTG GTTACGATTT TACGTTGCAA GGGGAGCCGA AAGCGGGAGA TACATTCTCT ATCAGTTTCA ACCAAAATGG ACTTAATGAT AACCGCAATG GCTTGATCAT GGCTAACCTG CAGAACGAGA ACGGCATGCA ACTCAATAAT GCGGGATCTG GTGATCCGGT TAGTTTCCAC GAAGCGTATG CCAATATTGT TGGGGATATA GGTCAAAAAG CAGCCAATGC GGATATTGCG GTCAAAGCAG GCGAGGCGCT AAAGCTACAA TCAAAAGATT GGTATGACTC AGTGTCAGGT GTGAGTTTAG ATGAAGAGGC GGCCAATTTA GTGCGCTTTC AGCAATCTTA TGCGGCTTCA GCTCGCTTAT TAAACACTGC GCAAGAGATG TTCGATACCA TTTTGAGTAT GGTGAGATAA
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Protein sequence | MIRTADLLSI ARSGVEASNQ LLSTTGNNIA NVNTEGYVRE RTNFVAELTG GVGQFTTERV MNTFAQNQLR RDTTNLAEHE AYWSKTAVLD NVFASEANSI SSSMSRFFAS LQTANDDPTN MSARQLVLGD AESMLGQMGT LSTFLAEKER EVNFEFEASL NKVNSLVESI ASFNESIRIA QANNRHDEPG ALMNQRDNAV LELSSLVSIE TRNSSNNDGS IMINLTSGES LVMQDGTFSV FEVNNSADLN YKSLQLTSNG KPTSLNLAET ELGGTIGGLF RYRDEVLEPS RRELGQIALA VTEAVNTQNR AGMDYDQQLG GEIFTRPITT ALNYPGNADS TSIVNGRISK GGASEITSAD YRVTIDGVTA GVPPTVDVTV ELLNLDGSAV TDVNGAAITQ NYTGLTAQSG EYNEIFGGIE LEFSKGTGYT VGDQFLLQPT KDVADKIEVF TTRPEDLALA SPIRIEAGED NLGGSELVST TVTNTFVDTA PFDSRSSGFD GAGGIHAPGA APGGGVGAPA AVRFNSATEY EVLDSAGTVI TTVSGISSMD NLLEQASGTP GWPAAFSALD NYPGYDFTLQ GEPKAGDTFS ISFNQNGLND NRNGLIMANL QNENGMQLNN AGSGDPVSFH EAYANIVGDI GQKAANADIA VKAGEALKLQ SKDWYDSVSG VSLDEEAANL VRFQQSYAAS ARLLNTAQEM FDTILSMVR
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