Gene Patl_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3066 
Symbol 
ID4174838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3700069 
End bp3701277 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content38% 
IMG OID638056092 
Productglycosyl transferase family protein 
Protein accessionYP_662626 
Protein GI109899371 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAT TTAGTATTAT CATTCCGGTT TTTAATCGCA CAAAATCACT TAAAAAAGCA 
CTCGAATCGG TGTTGTCGCA ATCCATTCAA AACTATGAGG TATTGATTGT TGATGATGGT
TCGACGCCCT CTATTGCAGA GGGAATTGAG CAGCTAGTGT TGAGTTTTCA AGAACCAAAA
CTAAAGCTTT TACGCCATGC CATTAATAAA AACGGGGCCG CTGCAAGGAA CACAGGTATT
AATGCTGCTT CAGGCAAGTA CATCTGCTTT TTAGACTCAG ACGATTTTTG GCTCCCAAAT
AAACTGGAAC GAGCCTTAGA ATACATCAAC ACAAAAACCT GTAGTGATAC CTTTTTAATC
CATCATCAAT ATAGCAATAG TGAAAACGGT AAACTCACTG AGTCTTTACC AAAAGCTGCG
AAAGCTAGCA GTGAATCTGT AGCGCATTAT TCTTTTGTTA CGAACAATGT TGGTGGCATA
CAATCAAGTA CCATTTGTGT ACCAACAATG GTGGCTAAAA ATTGTTTATT TGATGAAAGG
TTCTCAGGTC ATCAAGATTG GGATTTTGCA TTACAGGTAG GAGCAATGAC TCAACACTTT
TACTTTATCC CTGAGCCTTT AACAATTCGC AATAAAGATT CTGATGATAG TGTGGCGGAT
AACCTTAGCT GGGAATATTC CTTGTGGTTT TATGTGCAAC GAGCAAGTTA CTTTGATACA
CAATCTGCCT TGTATTTTTT CCAACGGGTG GTGTTAAGAA AGGCGGTTTT TTTCCTAGAA
CTTATGCCTG TTCTTAAGAA TAAATTAATG CTAAGAATTT TGCTTAGTAG TCCACGGGCA
ACGATAAAGG TTTTGATTTC ATTTGTTACG CAGGTTCGGC AATTACAAAA AAGAATCCGG
CAGGTAGAAT TAACCTGCAA AAATCGAAGT GTGACCCACT TGATGATTTG GGGCGGGAAT
GATTATGCTA GATCCCTTAT TTTAAATCTA AATAAGCGCT TTAAGGTATT AAGGGTAATT
GATTCCAAGG TTATGCACAG TCAGGCAAAA CTACAAGGTA TTGCTGTAAC GACACTTCAG
TCCATAAGTA AGGAAGAATT AGCCATGGTA CAGGGAATAA TTTTGGCAAC TAATAGACAT
CAAAATTCGA TGAAGCAAGA CATATTAGGT TTTGCCCCTA GGCTTATAGA AAAAGTAATA
GAGTTTTAA
 
Protein sequence
MLLFSIIIPV FNRTKSLKKA LESVLSQSIQ NYEVLIVDDG STPSIAEGIE QLVLSFQEPK 
LKLLRHAINK NGAAARNTGI NAASGKYICF LDSDDFWLPN KLERALEYIN TKTCSDTFLI
HHQYSNSENG KLTESLPKAA KASSESVAHY SFVTNNVGGI QSSTICVPTM VAKNCLFDER
FSGHQDWDFA LQVGAMTQHF YFIPEPLTIR NKDSDDSVAD NLSWEYSLWF YVQRASYFDT
QSALYFFQRV VLRKAVFFLE LMPVLKNKLM LRILLSSPRA TIKVLISFVT QVRQLQKRIR
QVELTCKNRS VTHLMIWGGN DYARSLILNL NKRFKVLRVI DSKVMHSQAK LQGIAVTTLQ
SISKEELAMV QGIILATNRH QNSMKQDILG FAPRLIEKVI EF