Gene Patl_3039 details

Gene Information

• Locus tag: Patl_3039
• Symbol: fliN
• ID: 4174811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3669143
• End bp: 3669538
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638056065
• Product: flagellar motor switch protein
• Protein accession: YP_662599
• Protein GI: 109899344
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAG AAGAAGGTTT AGATGATTGG GCAGCGGCCA TGGCTGAACA AGCAGATGAA 
GAAAGCAAAG ACGGTAACGC TACTGTTGCC GAATATGACG AGCTTGAAGA AGACAAAGAG 
ATATCCCCTG CGGAAAAGCG CAAGTTAGAT ACGATTTTGG ATATTCCTGT GACTATTTCT 
ATGGAAGTAG GACGTAGCCA TATCAGTATT CGCAATTTAT TGCAGTTGAA CCAAGGTTCT 
GTCGTTGAGT TAGACCGTGT CGCAGGTGAG CCACTTGATG TGTTAGTAAA TGGCACGTTG 
ATTGCTCATG GTGAGGTAGT AGTCGTCAAC GATAAATTTG GTATTCGCTT AACTGATGTT 
ATTAGTCAAC TGGAAAGAAT CAAAAAGCTC CGCTAA 

 

Protein sequence

MSEEEGLDDW AAAMAEQADE ESKDGNATVA EYDELEEDKE ISPAEKRKLD TILDIPVTIS 
MEVGRSHISI RNLLQLNQGS VVELDRVAGE PLDVLVNGTL IAHGEVVVVN DKFGIRLTDV 
ISQLERIKKL R