| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3033 |
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| Symbol | flhA |
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| ID | 4174805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3663521 |
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| End bp | 3665623 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056059 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_662593 |
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| Protein GI | 109899338 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTAA CAGCTTATCT TAATCGTTTC GACAAAAATC AATTTCAGTC TGTTATGTCT
GGACTTGGTG CGCCTCTTGT ATTGTTGGCC ATCATGGGAA TGGTTATTTT ACCCATGCCA
GCGTTTCTTC TCGACGTGCT GTTTAGCTTT AATATTGCTT TATCACTGGT CATTATCTTA
GTGTCTGTTT TCACTAAGAA GCCCGTCGAC TTCGGAATTT TCCCACTCGT TCTGCTAATT
GCCACTGTAC TGCGCTTAGC CTTGAATGTG GCATCAACAC GGATTGTTTT GCTGGAAGGG
CACGAAGGCG GTGATGCGGC GGGGAAAGTG ATCCAAGCAT TTGGCGAAGT GGTTATTGGT
GGTAACTACG CTGTGGGTAT TGTGGTATTT GCCATTCTGT TGATTATTAA CTTTAAAGTG
GTGACCGCAG GTGCTGGACG TATCTCAGAA GTGAGCGCAC GCTTTACGTT AGATGCAATG
CCAGGTAAGC AAATGGCCAT TGATGCAGAT TTAAACGCAG GTTTTATCGA CCAAGATGAA
GCCCGTAAAC GCCGGTTTGA AGTGACCAGT GAAGCCGACT TCTATGGCTC AATGGACGGT
GCGTCTAAAT TCGTAAAAGG GGATGCGGTT GCAGGGTTAT TCATTATGTT GATCAACATA
GTGGGCGGTT TATTCATTGG CATTTTTCAA CACGACTTAG CCTTCGGGCA GGCCGTCGAG
ATTTATACAT TGCTAACCAT AGGTGATGGC CTAGTTGCAC AAATTCCTTC GTTATTGTTG
TCTGTAGCGA CAGCGATAAT CGTCACTCGT GAAAACGACT CCCAAGAAAT GGGACAAGAA
CTCACTCGTC AATTAGGTAA TCGCCAAGCG TTATACATCA CCAGTGGTAT TTTGTTTGTC
ATGGGTATAG TGCCGGGCAT GCCGCATGTG GCTTTCTTGG GGTTTAGTGC GTTAGTGGGC
GGATATGCTT ATTACCAGCA CTGGAGCGAA AAGAAATTGG CCTCACAGCC GGAAGTATTG
GCGCCTGAAA AAGAACGTGG CACACCAAAA CCTGCTGAAA TCAAAGAACT AGGTTGGGAT
GACGTGCAAC ACGTTGACAC CATTGGTTTA GAAGTAGGTT ACCGCTTGAT CCCGCTGGTA
GATAAATCAC AAGGCGGCGA GTTATTGACA CGTATCAAAG GGGTCCGTAA GAAGTTGTCT
CAAGAGCTTG GCTTTCTTAT ACCTCCAGTT CATATTCGCG ATAATTTAGA TTTAAGTCCT
AACAACTACA CCATATCCAT GTTGGGAGTC TCTGTTGGCG AAGCGGAGAT CAGCCACGAC
GACGAGCTGG CGATTAACCC AGGTCAGGTA TTTGGCAAAT TAGATGGAAC CGTGACAAAA
GATCCAGCAT TTGGCCTAGA TGCCGTATGG ATCCGCTCGA ACCAACGTGA GCACGCACAA
ACGTTAGGTT ATACCGTGGT CGATAGCGCC ACGGTTGTCG CGACTCACCT AAGTCAACTT
CTGACTAATA ATGCGTATCA ATTACTTGGT CACGAAGAGG TTCAGCAGTT GTTGGATATG
CTTGCCAAGC AAAGCCCTAA ATTAGTAGAA GGTTTAGTAC CTGATATTTT GTCACTTAGT
ACCGTGGTTA AAGTACTGCA AACGCTATTG TACGAAGGCG TGCCTATCCG TGATTTACGC
ACCATTGTAC AAACCTTGTG TGAGTATGGA CCTAAGAGTC AAGATCCTGA TGTGTTGGTG
TCTGCGCTGC GTATCTCTCT TAAGCGCCTC ATCATTCAAG AGATCAATGG CGGACAAGCC
GAGTTACCAG TCATAACTTT GGCGCCAGAG TTGGAACAGA TGTTGCACCA GTCATTACAA
GCCGGTGGAG GAGATGGCGC AGGAATAGAA CCTGGTTTAG CTGAACGTTT ACAAAAGTCA
CTAAATGATG CTTCTCAACA GCAAGAATTA GCGGGCGAAC CTGCGGTGTT ACTCACCTCA
GGTATGTTAC GCCCAGTGTT ATCAAGGTTC TTGAAGCACG CAGTACAAGG TTTGCATGTG
TTGTCATATC AAGAAATTCC AGATGACAAA CAAATTAAAA TAGTCAGTGC GGTGGGTCAA
TAG
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| Protein sequence | MQLTAYLNRF DKNQFQSVMS GLGAPLVLLA IMGMVILPMP AFLLDVLFSF NIALSLVIIL
VSVFTKKPVD FGIFPLVLLI ATVLRLALNV ASTRIVLLEG HEGGDAAGKV IQAFGEVVIG
GNYAVGIVVF AILLIINFKV VTAGAGRISE VSARFTLDAM PGKQMAIDAD LNAGFIDQDE
ARKRRFEVTS EADFYGSMDG ASKFVKGDAV AGLFIMLINI VGGLFIGIFQ HDLAFGQAVE
IYTLLTIGDG LVAQIPSLLL SVATAIIVTR ENDSQEMGQE LTRQLGNRQA LYITSGILFV
MGIVPGMPHV AFLGFSALVG GYAYYQHWSE KKLASQPEVL APEKERGTPK PAEIKELGWD
DVQHVDTIGL EVGYRLIPLV DKSQGGELLT RIKGVRKKLS QELGFLIPPV HIRDNLDLSP
NNYTISMLGV SVGEAEISHD DELAINPGQV FGKLDGTVTK DPAFGLDAVW IRSNQREHAQ
TLGYTVVDSA TVVATHLSQL LTNNAYQLLG HEEVQQLLDM LAKQSPKLVE GLVPDILSLS
TVVKVLQTLL YEGVPIRDLR TIVQTLCEYG PKSQDPDVLV SALRISLKRL IIQEINGGQA
ELPVITLAPE LEQMLHQSLQ AGGGDGAGIE PGLAERLQKS LNDASQQQEL AGEPAVLLTS
GMLRPVLSRF LKHAVQGLHV LSYQEIPDDK QIKIVSAVGQ
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