| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3030 |
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| Symbol | fliA |
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| ID | 4174802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3660567 |
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| End bp | 3661295 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056056 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_662590 |
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| Protein GI | 109899335 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAACAGTA AAGCCGCTGC GTATCAGCAG TTAGATGACA GAAATGCACT GGTGGAGCGT
CATGCTCCAT TGGTAAAGCG CATTGCTCAT CATCTTATTG CCCGCTTACC CGCCAGCGTA
TTGGTCGACG ATCTCATTCA AGCCGGTATG ATTGGTTTAC TTGAAGCGTC TCGTAACTTC
GATGGCACCA AAGGTGCGAG TTTTGAGACC TTTGCAGGTA TTCGAATTCG CGGCTCTATG
CTTGACGAAA TTCGAAAAGG TGATTGGACA CCACGCTCTG TGCATAAAAA TGGCCGTGCG
ATAACGGATG CCATTAATAA AGTTGAGCGT GAGACAGGCC GTGACGCCAG AGATGTAGAT
ATAGCCAAAA AACTTGAAGT CAGCATTGAG CAATATCACC AAATGCTTGG TGAAGTGAAT
GCAGGTAAAA TTATTGGCAT GGAAGATTTA GGGGTATCGG AAGATGTGGT GACAACAGAG
CAAACTAAAG GCTCTGATAC TCCGTTTGAA GATTTGCTCC AAGGCTCTTT TCAAAAAGCC
TTAGCCCATG CCATTACAAC CTTACCTGAG CGTGAAGCAA TCGTATTATC ATTGTACTAT
GACGAAGAAT TGAATCTACG TGAAATAGGT GAAGTTCTAG ACGTGAGTGA ATCACGTGTT
AGCCAAATAC ACAGTCAAGC TATGCTAAAA CTAAAAAGTA AAATGCAGAC TTGGCGTATT
GAAGAATAA
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| Protein sequence | MNSKAAAYQQ LDDRNALVER HAPLVKRIAH HLIARLPASV LVDDLIQAGM IGLLEASRNF
DGTKGASFET FAGIRIRGSM LDEIRKGDWT PRSVHKNGRA ITDAINKVER ETGRDARDVD
IAKKLEVSIE QYHQMLGEVN AGKIIGMEDL GVSEDVVTTE QTKGSDTPFE DLLQGSFQKA
LAHAITTLPE REAIVLSLYY DEELNLREIG EVLDVSESRV SQIHSQAMLK LKSKMQTWRI
EE
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