| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2945 |
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| Symbol | |
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| ID | 4174713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3567469 |
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| End bp | 3568098 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055968 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_662507 |
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| Protein GI | 109899252 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.016551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACATGA TAGGCAGAAT ACGCGGCACA GTAGTAGAAA AACAGCCACC AGAGGTACTC
ATCGATGTAG CTGGAGTCGG CTATGAAATA CAAATTCCCA TGACCAGTTT TTATCAATTA
CCTGAGGTAG GTGCCGAGGC CAGCGTTTAT ACTCACTTTG TGGTGCGCGA AGATGCACAA
TTGTTGTTTG GTTTTGCTGA TAAAAATGAG CGCGCCGTAT TTAGAGAGTT AATTAAAGCC
AGCGGCGTAG GGCCTAAATT GGCATTAACG ATTTTGTCGG GCATGTCGGG GCAGCATTTC
ATGCAGTGTG TTGCACACGA AGACATTACC GCGTTGGTGA AGTTACCTGG CGTTGGTAAG
AAAACCGCAG AGCGTTTAGT GATAGAAATG CGCGATCGCT TTAAAAAACT AAGCTTAGAG
CAATCTGCAA GTGATGATTT TGCTCTGCAA GGCAATAATA GTATTGAAAA TACCTTTGTT
ACTTCAAGTG ATGCGAAAGA AGAAGCCCTA AGCGCACTGA TAGCACTTGG GTATAAGGCG
CCTCAAGCGA GTAAAGTGAT AAATTCTGTG TATGTAAAAG ACATCACCAG TGAAGAATTA
ATTCGCGAAG CATTGCGGGC AATGATCTGA
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| Protein sequence | MNMIGRIRGT VVEKQPPEVL IDVAGVGYEI QIPMTSFYQL PEVGAEASVY THFVVREDAQ
LLFGFADKNE RAVFRELIKA SGVGPKLALT ILSGMSGQHF MQCVAHEDIT ALVKLPGVGK
KTAERLVIEM RDRFKKLSLE QSASDDFALQ GNNSIENTFV TSSDAKEEAL SALIALGYKA
PQASKVINSV YVKDITSEEL IREALRAMI
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