| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2861 |
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| Symbol | |
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| ID | 4174620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3469829 |
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| End bp | 3471916 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055875 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_662423 |
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| Protein GI | 109899168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATAA CTACGTCTGT GTTTGATGTT ACTGCCCCGA ATTGGAACGA TATAAAGCAA
GCTGAAGTGA CCGGCGCCGC GAGCTTGCAA AGTGATGCCA GTGTACTAAT TCCGACGTCG
CAAGGTGAGT TACACATCGC ATTTCATACG TTTGGTGTGC GTGTACAAAT TGGCACGAAA
AATCAGCCTG ACTATGGCCT ACTCGTATCC ACGCCGGATG TAATAGCGGC AGATATCGTT
TCAAATGAGC AGCAAACAAC CCTGATTGCT GGTGAGAGTA AGTTGGTGAT CAACCACACC
CCCTTCACGT TTGAGTTATC ACAAAACAGT AAAACAATTC AGCAAACTGC GACCGATGGT
CACTTTGTGC GTCGCTACCG TTTACCGCCT CTAGCCAAAG TGGATAAAGG CTGGTTAATA
AGCCTAGAGC TTGGCACCGA CGAAGCCGTA TACGGCTTAG GCGAAAAATG GGGTAGCCTT
AATAAGCGCG GTCAACTGGT GCGCTCTTAC AACCACGATG CGCTAGGCGT AAATGCAGAA
ATTTCCTACA AAAACACGCC ATTTTGTTGG AGCCCCAGCG GTTGGGGCGT GTTTGTGCAT
ACCCCTGCCC CGGTAACACA TGCTGTGGGT TATGCCACTT GGTCACAACG TGCTTATGGG
GTATTGGTGG AAGATGAATG CTTAGATTTG TTCTTGATGC ACGGTGAGGA TGGTAATGCC
ATTATCAACA CCTACACAGA TTTAACCGGC AAAGCGCCGA CCCCTCCGGT ATGGAGCTTA
GGGGTTATTT TATCGAAAGC GTATTACAAA GATGTGCCTG AATTATTGGC TACGGCAAAA
GACGTACGCG ATCACAAAAT GCCGTGCGAC GTTATCACCC TTGACGGACG TGCATGGCAA
GACACAGATA CCCGCTTTGC CTTTGAATGG GATCCCAAAC GCTTTGACGA CCCCGCGGCG
GTGATCAATA AGCTCAAAGC AGACAACTTT AAAGTCTGCA TATGGGAATA TCCATTGGTT
TCTATTCAGC ATCCGCTTTT CGCCGAAATG GCCAAAAAAG GCTGGTTATT AAAAGACAAG
CGCACCGGCG AAGCGTATCA ATACAAGTGG GACATGAGCG CGTTTGCAGA AGTGCTGACG
CCGCTACCTG AGTCCGGCAT TGTGGATTTC ACCCACCCCG ATGCATATCA GTTTTGGATG
GAATCACACA AGCCCTTGTT TGATTTAGGC ATTGATATGA TAAAAGCCGA CTTCGGTGAA
CAGGTCGAAG ATGACAACAT GCTTGCTTAC AGCGGTGATT CAGGCAACCG CTTGCACAAC
ATTTACAGCT TTCTATACAA CAAGTGCGTG TACGAAGCCG CAGAGAAGTA TTCTAAAAAC
GGCCCTTTCT TGTTCAGCCG TTCAGCATGG ACCGGCTCAC AGCGCTTCCC TAGTCAATGG
GGCGGCGACC CACAAGCCGA TTGGGGCGGG CTAAGCGCCA GTATCCGCGG TGCTTTGTCG
TGGGGGATGT CAGGCGCGCC TTTCTTTGCC ACTGATATTG GCGGGTTCTT CAAAGACACA
CGAGATCAAG AGCTCTTTAT TCGTTGGTCA CAAGCCGCCG TATTCAGTGC TCATATGCGT
TTACACGGCA TAGGTCAGCG TGAACCTTGG AGCTATGGCC CGGAAGCAGA AGATGCAGTA
AACCAAGCAT TGGTGCTACG TTATCGCTTA CTACCGTATA TTTACAACGC CATGCAACAA
GCAAGTAGTA CAAGTGTTCC TTTGATGCGC GCGATGCCAT TGGCCTTTCC CAAAGATCGT
GTAGCGGCAG CGTTTGAATC GCAGTTTATG TTCGGTGATG ACATGTTAGT GGCTCCCTGC
TTAAAACCCG GCGGAGAAGT AGAGTTCTAC TTACCCGAAG GTGAATGGCA ACGCTTCCCA
AGTGAACAAA CCTACCAAGG TGGCAAGGTT TATAACCTAA CCCTTGGCGC TCAAGAAATG
GCCGTGTTCG TACCTAAGGG CAAGCGCATA CCACTTGGGC CAGATGTTGA ACACACGGAC
GAGTTGACTG ATCAGCAACC GCAAATTAGC CATTACTGGC CCAAATAG
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| Protein sequence | MSITTSVFDV TAPNWNDIKQ AEVTGAASLQ SDASVLIPTS QGELHIAFHT FGVRVQIGTK
NQPDYGLLVS TPDVIAADIV SNEQQTTLIA GESKLVINHT PFTFELSQNS KTIQQTATDG
HFVRRYRLPP LAKVDKGWLI SLELGTDEAV YGLGEKWGSL NKRGQLVRSY NHDALGVNAE
ISYKNTPFCW SPSGWGVFVH TPAPVTHAVG YATWSQRAYG VLVEDECLDL FLMHGEDGNA
IINTYTDLTG KAPTPPVWSL GVILSKAYYK DVPELLATAK DVRDHKMPCD VITLDGRAWQ
DTDTRFAFEW DPKRFDDPAA VINKLKADNF KVCIWEYPLV SIQHPLFAEM AKKGWLLKDK
RTGEAYQYKW DMSAFAEVLT PLPESGIVDF THPDAYQFWM ESHKPLFDLG IDMIKADFGE
QVEDDNMLAY SGDSGNRLHN IYSFLYNKCV YEAAEKYSKN GPFLFSRSAW TGSQRFPSQW
GGDPQADWGG LSASIRGALS WGMSGAPFFA TDIGGFFKDT RDQELFIRWS QAAVFSAHMR
LHGIGQREPW SYGPEAEDAV NQALVLRYRL LPYIYNAMQQ ASSTSVPLMR AMPLAFPKDR
VAAAFESQFM FGDDMLVAPC LKPGGEVEFY LPEGEWQRFP SEQTYQGGKV YNLTLGAQEM
AVFVPKGKRI PLGPDVEHTD ELTDQQPQIS HYWPK
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