| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2825 |
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| Symbol | |
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| ID | 4174585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3426757 |
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| End bp | 3427509 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055841 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_662389 |
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| Protein GI | 109899134 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.994301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAA TATCTTCGGT ACAATTGAAG CAATTGATAG AGGCCGCGGT GTTTGTATCA
GATGCACCGG TTAGCCAAGA ACATTTGCAA GATACGGTGT TAAGTGGCCT TAAAGTGACT
AAAAAAGCAC TCAAGGAAGC CATAGAAGAA TTACAGGTAG AATATCAATC TCGCGGTGTA
CAGCTGGTTG AGGTAGCCAG TGGCTATCGC TTTCAGTCAA TGGATAGCTT AGGACCATGG
TTAAGCAAGC TGTGGCAAGA GCAAGCGCCA CGATATTCAA GAGCTTTGCT GGAAACCTTG
TCGATGGTGG CCTATCGCCA ACCCATCACG CGAGGTGAAA TAGAAGATGT ACGTGGTGTG
GCGGTAAGTA GCCATATCAT GAAAACCTTA ATAGAGAGGG ATTGGGTGAA AGTGGTAGGG
CACAAAGAAG TGCCGGGACG CCCAGCCTTG TATGCAACAA CAAAAGGATT TTTAAACTAT
TTCTCGTTAA AGAGATTGAA AGACTTACCC AGTCAAGATG CCTTCGATGC GAGTAATAGC
CAGGATGAAC GCCGAGTTAT TACTGAGCCT GATGACACTA GCCATCAGCA AGTCAGCACA
GCACCTGTGC ACAGCACTAA AGGTGATAAC TCATCAGGCG AGCAATCAAC GACAGAAGAA
CAAATACCGT CAAAACAAGC AGCGTCAGAC CAAGCACAAG AGTCTAAGCT TGATAATACT
GACAACCCTA ATCAAAGAGA GCAGTTACAC TAA
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| Protein sequence | MAKISSVQLK QLIEAAVFVS DAPVSQEHLQ DTVLSGLKVT KKALKEAIEE LQVEYQSRGV
QLVEVASGYR FQSMDSLGPW LSKLWQEQAP RYSRALLETL SMVAYRQPIT RGEIEDVRGV
AVSSHIMKTL IERDWVKVVG HKEVPGRPAL YATTKGFLNY FSLKRLKDLP SQDAFDASNS
QDERRVITEP DDTSHQQVST APVHSTKGDN SSGEQSTTEE QIPSKQAASD QAQESKLDNT
DNPNQREQLH
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