| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2818 |
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| Symbol | |
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| ID | 4174578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3419195 |
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| End bp | 3421357 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055835 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_662383 |
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| Protein GI | 109899128 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.215558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGCAA AGGCAGGCTT ATCGATTCGC GCACGTTACA TATTAGCCCT CTCATTAGTT
GCCGCAACTG TCAGTGGTTC AGCTCTGACC CTCAAATATA TTTTCAACGC ACAAGCTACT
GATGCATATG TGATTAACGT AGCCGGTCAA CAAAGGATGT TGTCCCAACG GATAGCCCTT
TCCATATATC GCCTATCAAC TTGCCCTAAT GATGAACTAA CGGTTAGCGC TACCAAAAAC
ACCCTAAAAA GCGCGCTAAG TCAGTTTAAA GCCAACCATG TTTATTTAAC TAATTTGCCT
AATATTCCTC CCTCGATACA CGACTTATAC TATGGCGAGC ACGCATTAGA ATTGGCAAGC
ATGCGATATG CAGATGAAGC AAACACATTC CTAAATCTTG ACTCCACTTG CATTGCTCCA
CCACATCACT TTGATGCACA AAATAGTGAT GCATTACTAT TGAGACTTGA TCAGGCAGTA
AAGGCCTTTG AAGATGCCGC AACGGCCAGG GTTCAACGCG TTGAGAATAT AGAAATGTTT
TTATGGGGTT TCACTTTACT GCTACTACTG TGTGAGGCCA TATTTATTTT CAGACCGATG
GAGCAACAAA TCACGTTTGC GCTGGCATCG TTAAAAGACG CTCTATCGGC ATCTAAAAAA
GCGCAAGCAG AAGCTATTGA TGCAAGTAAA GCTAAATCGG AATTCCTTGC CAGCATGAGC
CACGAACTTC GCACGCCCAT GAATGGTTTA TTCGGTATGA TGGAACTAGC CATTGATAAT
CCTCACAAAA GTGGGGAATA TTTAAAGAAA GCTAAAAATG CCGGTAGGCA ACTGTTAGTG
TTGATCAATG ACGTCCTTGA TCTATCGAAA ATTGAAGCAG GTAAACTACG TATTGAGCGC
ACATCTGTAG ATTTGTTACA ACTGATGGAC GACGTAACCT CTGTACAATC GGCTAATTGT
CGCTTAAAAA AATTAGCCTT TGATTATCAA AAACAAACCA ATCTGCCTGC GTATATTGTG
GGAGATCCTA CTCGCATAGC GCAAATTTTA CACAACCTAT TAAGTAACGC GATTAAGTTT
ACGCAACAAG GCACAGTGAC CTTGAGAATT GGGGTGTTTG TCACAGAGAA GCGCCACTGG
TTAACAATCG ATGTGCAAGA CACAGGAATG GGCATCCCCC CTGAAAAGAC ACGAACTATA
TTCAATAAAT TCGAACAAGC AGACCAATCA ACTACCCGTA TACACGGTGG CACGGGTCTA
GGTTTATCTA TCGCCAAACA ACTGACTGAC TTGATGGGCG GCAAATTAAC CGTACAAAGC
AAAGTGGACA AAGGCAGTTG CTTTACGTTT TCCGTACCGA TAGAAATCGA TGACAAACAG
GTCGAAAATA TTTATTCGAA ACAAACATTA CGCTGTGCAA TTGTGGACGA TCTACAAACC
AGTCGAGAGT ATATTCAGCA TATCGTCACG TCTTTAGGGT GCTTACCTAA CACATTCGAT
AATGCAGAAG ACTTCTTAGC TAGCGATATA TCTCAGTTCG ACGTTTTGCT GCTTGACCTG
TCGATGCCTG AAATAACCGG TGTGGATGTG GTCGAAACAC TAAGAGATCG GCAATTAAGC
AAGCTACCGC ATATCATCAT TGTATCGGCG GTCATAGAGC ATCTTGACTG CTCTACATCT
GTACGTGATT TGATTTGGCG CACCCATGCA AAACCTATTG TAAGGCAAGA GTTAGAGAGC
GACTTAAAGA AGCTGCAAAA CTTCTATTCT CGCCAGCACA CCTCTATCGA AGAGGAACAG
CCAGAACATA AAATTCTGAT CGTAGAAGAC AACGAAATTA ATGCAGAAGT GGTCAAAGTC
ATGCTTGAAG GCGCGGGCTA TCAAATCGTT ATTGCCACTG ACGGCGAGAA AGCATTGCAG
GCCTGTATTT TCGAACAATA TGACCTAATT TTGATGGATA TGCACATGCC TGTAATGGAT
GGCATCACCG CTACTCAAAA ATTAAGAAGG GAAATGAACT TTACGAATCC TATCATTGCT
TTGTCAGCCA ATGCGTTTGT CGAAGACAGA GAGCACTGCA TAGAGGCTGG AATGAACGAC
TTTATTTCTA AACCTGTTGA GAAACAGGCC TTATTGGCCA CCATTAAACG GCATATAAAG
TAA
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| Protein sequence | MAAKAGLSIR ARYILALSLV AATVSGSALT LKYIFNAQAT DAYVINVAGQ QRMLSQRIAL
SIYRLSTCPN DELTVSATKN TLKSALSQFK ANHVYLTNLP NIPPSIHDLY YGEHALELAS
MRYADEANTF LNLDSTCIAP PHHFDAQNSD ALLLRLDQAV KAFEDAATAR VQRVENIEMF
LWGFTLLLLL CEAIFIFRPM EQQITFALAS LKDALSASKK AQAEAIDASK AKSEFLASMS
HELRTPMNGL FGMMELAIDN PHKSGEYLKK AKNAGRQLLV LINDVLDLSK IEAGKLRIER
TSVDLLQLMD DVTSVQSANC RLKKLAFDYQ KQTNLPAYIV GDPTRIAQIL HNLLSNAIKF
TQQGTVTLRI GVFVTEKRHW LTIDVQDTGM GIPPEKTRTI FNKFEQADQS TTRIHGGTGL
GLSIAKQLTD LMGGKLTVQS KVDKGSCFTF SVPIEIDDKQ VENIYSKQTL RCAIVDDLQT
SREYIQHIVT SLGCLPNTFD NAEDFLASDI SQFDVLLLDL SMPEITGVDV VETLRDRQLS
KLPHIIIVSA VIEHLDCSTS VRDLIWRTHA KPIVRQELES DLKKLQNFYS RQHTSIEEEQ
PEHKILIVED NEINAEVVKV MLEGAGYQIV IATDGEKALQ ACIFEQYDLI LMDMHMPVMD
GITATQKLRR EMNFTNPIIA LSANAFVEDR EHCIEAGMND FISKPVEKQA LLATIKRHIK
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