| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2797 |
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| Symbol | |
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| ID | 4174557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3397555 |
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| End bp | 3399066 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055814 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_662362 |
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| Protein GI | 109899107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGTG AGGTTCTTAT TTTGCGTTCA GCCTGCGTTG TTTTTCCAAA TCAATTGTTT
GAACATAATC CTTGTTTGAA GGGACAAGGC CATAAAGTGT GGTTAGTCGA AGACGATTTG
TTTTTCGGTG ATAGCCAGTA TCCCCAACGC TTTCATCAGC AGAAACTGCA ATTGCATATG
GCATCTATGG ACTATTATCA TTCGACGTTA ACGGCGCTAG GCCACGATTG TCATTATATC
GAATATAGAG CTGAAGAACC CGCTATGAAG AGGCTGTTCA ACGCACTAGG AGAGCAAAAA
ATTGAGCAGA TCCACACGGT GGACCCCGTG GACTTCATAC TGAAGAAGCG CTTAGAGCAA
TACGCTTACG AAGGTCATAT TCAAATCACG TGGCATAAAA ACCCAGGTTT TCTCAATACA
CAGCGTCAAA ATAGTGCCTA CCGTGACAGC AAAAAGCGCT GGTTTATGGC GGACTTTTAC
CGTCACCAGC GCACTCGCCT TAATATTTTG ATGGACGGAG ACAAACCCGT TTCCGGTCGA
TGGAGTTTCG ATGAAGAAAA TCGCAAAAAA ATTCCGAAAA AAGAAATAGC AAACATTCCA
GAAATTCAAT TTTGTGCAAA GACTCAATAC CACACCCAAG CCATCGAGCG CATTAATGCT
GATTTTTCTG ATCATCCAGG CAATGGCCAA ACGATCATAT ATCCGGTCAC GCATGAGGAC
GCACAATTAT GGTTGACCGC CTTTTTTGAA CAGCGTTTTA AATATTTTGG CCGATTTGAG
GATGCCATAG TAGAAGGTCA AAATTGGCTT TATCACAGTG TCCTTACCCC TATGCTGAAT
ATCGGGCTTT TAACGCCCAA ACAAGTCATC AGCCAAGCGA TTCAATGTGC CGATGAGCAC
GAGGTGGACC TTGCGAGCCT AGAAGGCTTT GTTCGGCAAA TCATAGGCTG GCGAGAGTTT
ATGCGCGCGA CCTACAGTGA CATTGGCGTA TCAATGCGCA CGCAGAATCA CTGGCAACAT
AAGCGCAAAA TACCCAGTGC ATTCTACACC GGGGACACAG GCATTATCCC GCTAGACGAT
ACCATCAAGC GGATATTACA AACGGGTTAT TGCCATCACA TTGAGCGGTT GATGGTACTA
GGCGGCTTTT TCTTTTTATG CGAATTCGAG CCGGATGAAA TCTATGGCTG GTTTATGGAC
ATGTTTATTG ACAGCTACGA TTGGGTGATG GTGTCCAACG TGTACGCGAT GAGCCAGCAC
GCAGATGGCG GACAAATCAC CACCAAGCCC TATTTCAGTG GCTCTAATTA CATCATTAAA
ATGAGTCACT ACAAAAAAGG AGCTTGGTCG GATATATGGG ATGCGCTGTA CTGGCGATGG
ATAATAAAAA ACCACGCTGA ACTAAAGAAA AACCATCGCT GGGCTATGAT GTGCAGCCAA
GTAGATAAGA TGGAGGAAGA TAAAAAAAAC GCCTACCTGA CAGAGGCCAA CACGTATTTG
TCTGGGTTAT AG
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| Protein sequence | MFSEVLILRS ACVVFPNQLF EHNPCLKGQG HKVWLVEDDL FFGDSQYPQR FHQQKLQLHM
ASMDYYHSTL TALGHDCHYI EYRAEEPAMK RLFNALGEQK IEQIHTVDPV DFILKKRLEQ
YAYEGHIQIT WHKNPGFLNT QRQNSAYRDS KKRWFMADFY RHQRTRLNIL MDGDKPVSGR
WSFDEENRKK IPKKEIANIP EIQFCAKTQY HTQAIERINA DFSDHPGNGQ TIIYPVTHED
AQLWLTAFFE QRFKYFGRFE DAIVEGQNWL YHSVLTPMLN IGLLTPKQVI SQAIQCADEH
EVDLASLEGF VRQIIGWREF MRATYSDIGV SMRTQNHWQH KRKIPSAFYT GDTGIIPLDD
TIKRILQTGY CHHIERLMVL GGFFFLCEFE PDEIYGWFMD MFIDSYDWVM VSNVYAMSQH
ADGGQITTKP YFSGSNYIIK MSHYKKGAWS DIWDALYWRW IIKNHAELKK NHRWAMMCSQ
VDKMEEDKKN AYLTEANTYL SGL
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