Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2758 |
Symbol | |
ID | 4174518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3350683 |
End bp | 3351270 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638055775 |
Product | PEP motif-containing protein |
Protein accession | YP_662323 |
Protein GI | 109899068 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0185789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA AAATAAAGTA CTTTTGTTAC GCACTCACCG CAATAGGATG GTTAGCACAA TCCGCAAATG CGGCGGTAAT CACCATGACG CCAAGTTCAC AAACTATTGA ACTGGGTGAA ACAGCGAACG TCGATGTGTC CATTTCTGAT TTTGCGACCG ATCAGTATTT AGGTGCGTAT GATTTTGAGG TTGCTTTTAA CGACTCTATT TTGTCGGTGA GTAACATCGT ATTCGGCACA GAGCTAGGAT TTAGTTTTCA AGACGAGTTC TCATTTGGTG CAAACCTGCA TGCCGTTCTC GAATCCTCTC TAGAAGATGC ACAATACTTG GTTGACAACC AAGCAAGTGA ATTTCTACTG TTTAGCATTG AGTTTACCGC TGTAGGGTTT GGCACCAGCT CGGTTGCTTT TGATTCTAGT TTACTTGGTG ATCAAGACGG CAATGAGATT ACTGATGTTG ATTTTAACAG TGCACGCATC ACCGTTAATA ACCCCAATGC GGTTCCTGAG CCCGGTGCCC TGAGTCTATT ATTAGCTGGA TTTGCTTTTG TCGCGATACG CAAACGTGCT AACTACAAAG CGAGATAA
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Protein sequence | MLKKIKYFCY ALTAIGWLAQ SANAAVITMT PSSQTIELGE TANVDVSISD FATDQYLGAY DFEVAFNDSI LSVSNIVFGT ELGFSFQDEF SFGANLHAVL ESSLEDAQYL VDNQASEFLL FSIEFTAVGF GTSSVAFDSS LLGDQDGNEI TDVDFNSARI TVNNPNAVPE PGALSLLLAG FAFVAIRKRA NYKAR
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