Gene Patl_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2758 
Symbol 
ID4174518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3350683 
End bp3351270 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID638055775 
ProductPEP motif-containing protein 
Protein accessionYP_662323 
Protein GI109899068 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0185789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA AAATAAAGTA CTTTTGTTAC GCACTCACCG CAATAGGATG GTTAGCACAA 
TCCGCAAATG CGGCGGTAAT CACCATGACG CCAAGTTCAC AAACTATTGA ACTGGGTGAA
ACAGCGAACG TCGATGTGTC CATTTCTGAT TTTGCGACCG ATCAGTATTT AGGTGCGTAT
GATTTTGAGG TTGCTTTTAA CGACTCTATT TTGTCGGTGA GTAACATCGT ATTCGGCACA
GAGCTAGGAT TTAGTTTTCA AGACGAGTTC TCATTTGGTG CAAACCTGCA TGCCGTTCTC
GAATCCTCTC TAGAAGATGC ACAATACTTG GTTGACAACC AAGCAAGTGA ATTTCTACTG
TTTAGCATTG AGTTTACCGC TGTAGGGTTT GGCACCAGCT CGGTTGCTTT TGATTCTAGT
TTACTTGGTG ATCAAGACGG CAATGAGATT ACTGATGTTG ATTTTAACAG TGCACGCATC
ACCGTTAATA ACCCCAATGC GGTTCCTGAG CCCGGTGCCC TGAGTCTATT ATTAGCTGGA
TTTGCTTTTG TCGCGATACG CAAACGTGCT AACTACAAAG CGAGATAA
 
Protein sequence
MLKKIKYFCY ALTAIGWLAQ SANAAVITMT PSSQTIELGE TANVDVSISD FATDQYLGAY 
DFEVAFNDSI LSVSNIVFGT ELGFSFQDEF SFGANLHAVL ESSLEDAQYL VDNQASEFLL
FSIEFTAVGF GTSSVAFDSS LLGDQDGNEI TDVDFNSARI TVNNPNAVPE PGALSLLLAG
FAFVAIRKRA NYKAR