| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2640 |
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| Symbol | |
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| ID | 4174400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3202543 |
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| End bp | 3204984 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055659 |
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| Product | agarase |
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| Protein accession | YP_662207 |
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| Protein GI | 109898952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.503821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC CACAATTCAT TACAAAGGTC GCCTTTAGGG CAAGCGCGAT TGCGCTAGCT
ATTACCCTAA CCGGCTGTAG TCATGATCAA CATGAAATTG CTCAGGCTCA GGGTGTTCCA
CAAGACCTTG CTGGAAACGG TAGCCCACTA GGCAGTGCAG AGGACGCGTT TACCAACGAG
CAAAAAATCG TCTCACTGAT TGACTTTGAT AACCAAGAGC AACTTAACTG GCTGCAGCAA
AGTGATACCT CATTCGCGCA GATCACCAGC AGCGAGAGCT TAATTGACAA GCAATTAGCG
GTGGAGTTTG CGAAAACCGG TAATATTTCC ACGTTGCGCG TAGAGCCACC GAAGCCTTGG
GATCTTAGGG AGTACGAAAA CTACAACATT GCCTTTGATG TGCAAAACAC CAGCCCAGAT
TCAGTTCATT TGTACTTGTC TTTGGAAAAT GTAAACGGAC AAATCCAGAG TCACTCAATT
TCTCTGGCTC CGAATTACAA AGGCACGGTG TATTTTCCCC TCGATGGTAT TGAAGCAGAA
ACCGACAGCG GCATGTGGGG AGATGTGCCT CATTGGCAAA CCCAAGACGA CTTAATGGTG
TGGCGTTCTT GGCGCAAAGC AGAGCAAGAC TATAGCCAAC TCACCGCGCT TAATTTCTTC
ACTATTGGAA TATTGGAAAA CAAATCTGTG ATTTTGGATG ATGTGCGTCT GCGCGCGAAT
CCAGCTCACG ACCCGAACGT ATCGGTCGGA TTAATCGATA AATACGGGCA AAACGCCAAA
CAAAGCACCC CCTTAGATGT GCATTCAGAT GCCCAACTAA AACAACAAGC CGATGAAGAA
CTGGCCAAGC TAGCCAAATC ATCGGGTATG CCAGACCGTT CTCGTTTTGG TGGTTATACC
AAAGCCCCAA AACGTGAAGC AACCGGCTTT TTTAGAACGG AAAAGGTCGA TGGTAAGTGG
TGGATGGTCG ACCCTGATGG CTATCTGTTT TTCTCACACG GGCCAGCTAA CGTGCGTATG
GCAAACATGA GTACGTTAAC CGGAATAGAC TACGACCAAC CGAGTATTCG CGTGCGCACC
AGTGATGAAA TTACCCCAGA AGATTCCATG GGAATTGTAT CTGTTCCTGA CAGCGCAAAA
GAAAAACGCT ATGTCATTTC AAAGGCGCGC AACGATATGT TTCAGTGGTT ACCAAGCTAT
GATGATGAGC TCTCTGAGCA CTATAGCTAT CGCCGCTCTA CCCACAAAGG GCCTATTCCT
TACGGCGAGA CCTACAGCTT TTACCGCGCT AATTTAGAAC GTAGATACGG TGATGACGAC
CTACGCGCAG GTGAAGGTGA AAAAGCAGGC GAAAATCAAG GCAGCGATCC TTCCTACGTA
AAAAAATGGC ATGACGTCAC CGCACAGCGT ATGCATGACT GGGGGTTTAC CTCTTTTGGT
AACTGGGTAG ACCCAGCGTT TTATCAATCA GAGCAAGTGC CTTATTTCGC CAATGGTTGG
ATCATCGGCG ATTACCAAAC ACTGTCGGGT CACACTAATC ATTGGGGCTT GATGCCAGAT
CCTTTTGATC CCGTATTTGC ACAGCGAGCA AAGGTCACTA TCGATGCTAT TGCCGAAAAT
ATTCAAGCGT CACCTTGGTG TGCGGGTATT TTTATTGATA ATGAGAAGAG CTGGGGAGAG
CGTGAAGGCA CAGTGTCACA ACGCTATGGG GTGATCCTTG ATGCACTATC AAAAAATATT
GAGAAGAGCC CTGCAAAAAC GGCCTTTGCA GCCCATTTGC AGCAAAAATA CCAGACGATC
GATGCATTGA ATTCTGCATG GTCATCACAC TTCGATAGTT GGCAAATGTT TGAAGATGAC
GCCAGCGTCA GCACGCACAC CGATGCCCAA ATTGCTGATT TGTCAAAAAT GCTCGAGATG
CTGGGTGAGC AGTACTTTAA AGTGGTACAC AATACCTTAG AAGCGGCGCT GCCAGAGCAC
TTGTACATGG GCGCGCGCAT GGCCAACTGG GGCATGCCTG ATGAAATCAT TACTGCCTCT
TTGAAATACT CTGACGTACT GAGCTTCAAT ATTTATGAGG AAGGGGTGCA AGAAGACTAT
TGGAAGTTCC TTGAAGAAGT CGACTTACCC GTAGTGATTG GTGAGTTTCA TATTGGCAGC
ACGACAGATT CAGGCATGTA CAACCCGGGT ATTGTGCACA GCGCAAACCA GCAAGACAGA
GCCCAAATGT ACAAAGATTA CATGCAAAGC GTGTTAGACA AGCCGTATAT GGTCGGGGCC
CATTGGTTTC AATACATAGA TGAGCCCATA TCGGGGCGTG CATTTGACGG CGAAAACGCC
AATATCGGCT TTGTAACGGT AACGGATATC CCATATCCGC ATATGATCCA AGCGGTCAAA
GAGGTGACAT CCACCATGTA CCAAAAACGC TTAGCCGACT AA
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| Protein sequence | MKYPQFITKV AFRASAIALA ITLTGCSHDQ HEIAQAQGVP QDLAGNGSPL GSAEDAFTNE
QKIVSLIDFD NQEQLNWLQQ SDTSFAQITS SESLIDKQLA VEFAKTGNIS TLRVEPPKPW
DLREYENYNI AFDVQNTSPD SVHLYLSLEN VNGQIQSHSI SLAPNYKGTV YFPLDGIEAE
TDSGMWGDVP HWQTQDDLMV WRSWRKAEQD YSQLTALNFF TIGILENKSV ILDDVRLRAN
PAHDPNVSVG LIDKYGQNAK QSTPLDVHSD AQLKQQADEE LAKLAKSSGM PDRSRFGGYT
KAPKREATGF FRTEKVDGKW WMVDPDGYLF FSHGPANVRM ANMSTLTGID YDQPSIRVRT
SDEITPEDSM GIVSVPDSAK EKRYVISKAR NDMFQWLPSY DDELSEHYSY RRSTHKGPIP
YGETYSFYRA NLERRYGDDD LRAGEGEKAG ENQGSDPSYV KKWHDVTAQR MHDWGFTSFG
NWVDPAFYQS EQVPYFANGW IIGDYQTLSG HTNHWGLMPD PFDPVFAQRA KVTIDAIAEN
IQASPWCAGI FIDNEKSWGE REGTVSQRYG VILDALSKNI EKSPAKTAFA AHLQQKYQTI
DALNSAWSSH FDSWQMFEDD ASVSTHTDAQ IADLSKMLEM LGEQYFKVVH NTLEAALPEH
LYMGARMANW GMPDEIITAS LKYSDVLSFN IYEEGVQEDY WKFLEEVDLP VVIGEFHIGS
TTDSGMYNPG IVHSANQQDR AQMYKDYMQS VLDKPYMVGA HWFQYIDEPI SGRAFDGENA
NIGFVTVTDI PYPHMIQAVK EVTSTMYQKR LAD
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