| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2578 |
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| Symbol | |
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| ID | 4174338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3125056 |
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| End bp | 3126201 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055599 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_662147 |
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| Protein GI | 109898892 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGATT TTTGTATAGT AGGCGGCGGT ATGGTCGGCG CAGCAACGGC ATTAGGCTTA
GCGCAAAAGG GATTCTCTGT GGCGTTAATT GAAACCAATA TGCCAAAACC GTTCGAGGCA
ACTGACGAGC CTGATATGCG CGTGTCAGCC ATCAGTGTCA CCTCACAAGC GTTACTTGCG
TCTTTAGGGG CGTGGCAACA TATTGAAAGC ATGCGTACGT GCACTTATCG GCGTTTGTCA
GTGTGGGAGA ACTCCTCAGG GCGCACTGAT TTCGATAGCG CTGATATTCA AGCAGAGCGC
CTTGGCTACA TCATTGAAAA TCGTATTTTA CAGCTTGGCC TGCACGCAGC GTTATTGCAG
TGCGAAAATG TGACTTGGTT TACCCAAAGT GAGATTACTA AGCTCGTCAC TCATGGGTTC
CCCGAGGTGC ATTTTGCTGA CCAGAGTCAA TTGACCTGTA AATGGTTAAT TGGGGCTGAT
GGTCTGCATT CTCGCGTGCG CACAGCAGCG AATATTGGTA CCAAAGGATG GCAATATCGC
CAGCAGGCGT TTGCTATTCA AATTATCACC CATGCTGCCC AGCAAGACAT CACTTGGCAA
CAATTCATAC CAACTGGACC TGTGGCCTTT TTGCCCATGT ATGGGCAGTT TGCGTCACTG
GTGTGGTACA ACACCAGTGA CAACATCAAT CACTTAAAAG CATTATCTAA AACTGCACTC
AAGCAGGAAA TTAAAAAAGC GTTTCCAAAT GAGTTAGTGG ATTTTGATGT GCTAAAAACA
GCCCGTTTTC CTTTGATGCG AATGCACGCG AATCAATACG TTAAGCACCG GGTCGTGCTG
GTGGGTGATG CGGCTCATGC TATTAATCCG CTGGCTGGTC AAGGGGTCAA CCTTGGTTTT
AAAGATGTGG CTGCGTTACT TGATTGCATC GATGGGGATA ACCCCTCAGC GGAAAATATC
ACGGCGTATG AAAGCAAGAG GCGCAATGAT AATTTACTCA TGATGAGTGC TATGGATGCA
ATATACAGCA CATTTAAACA GCGCAACCCG TTAGTCAAAG CAGCGCGTAA TATCGCTTTG
AAACTGGCTA ATAATGGCGG CGTAGTTAAA CAGCAAGTCA TGAAATATGC CATGGGGTTA
GATTAA
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| Protein sequence | MFDFCIVGGG MVGAATALGL AQKGFSVALI ETNMPKPFEA TDEPDMRVSA ISVTSQALLA
SLGAWQHIES MRTCTYRRLS VWENSSGRTD FDSADIQAER LGYIIENRIL QLGLHAALLQ
CENVTWFTQS EITKLVTHGF PEVHFADQSQ LTCKWLIGAD GLHSRVRTAA NIGTKGWQYR
QQAFAIQIIT HAAQQDITWQ QFIPTGPVAF LPMYGQFASL VWYNTSDNIN HLKALSKTAL
KQEIKKAFPN ELVDFDVLKT ARFPLMRMHA NQYVKHRVVL VGDAAHAINP LAGQGVNLGF
KDVAALLDCI DGDNPSAENI TAYESKRRND NLLMMSAMDA IYSTFKQRNP LVKAARNIAL
KLANNGGVVK QQVMKYAMGL D
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