| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2575 |
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| Symbol | |
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| ID | 4174335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3120677 |
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| End bp | 3122092 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055596 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_662144 |
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| Protein GI | 109898889 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.12327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTCTG AACTTGTCAG TTTTATCAAC AATATATTAT GGGGTGATGG TCAGGTATTG
ATTTACCTGC TTATCATTGC GGGAGTTTGG TTTACCTTTA AACTAAATTT TATTCAGTTA
CGCCACTTTA CGCACATGTT CGGTGTCATG AAAGGCAGTA ACAAAAGTGA CAAAGCAGGG
ATCAGTTCTT TTCAAGCGCT GTGTACCAGT TTATCCGCTC GGGTGGGTAC AGGTAACTTA
GCAGGTGTCG CAGTAGCGAT TTCATTAGGC GGAGCTGGCG CTGTATTTTG GATGTGGGTT
ATTGCTCTAC TTGGAATGGC AACCGGCTTT GCCGAAAGTG TTTTAGGCCA ACTCTATAAG
GTACGTGATG ATAACGGCGA ATATCGTGGT GGGCCCGCTT ATTATATTCA ACAAGGATTA
AACAAACGTT GGTTAGCTAT TACCTTCGCA CTCTTCTTGT TCCTTGGTTA TGGCTTTATC
TTCAGTGCCG TGCAAGCCAA CACGATTACT GACGCGCTAA ATTTCGCTTA CGATATCCCT
ACCCTGCACT CAGGGTTAGT CATCATCGGA TTAGCGGCAC TTATCGTAGT GGGCGGGCTT
CGTGCTATTG CTCGTTTCGC TGAGTGGGTT GTTCCTTTTA TGGCAGTGGG CTACGTAGCG
GTCACCTTAT TCGTGACCAT TATGAACATC GACATGCTCC CTGGGATGCT GATGGATATC
ATCAAGTCAG CCTTTGGCTT GCAAGAAGCC GGTGCAGGTG CATTGGGCGC TGCCTTTAAA
AATGGTGTAC AGCGGGGGCT TTATTCAAAT GAAGCGGGCT CAGGTAGTGT GCCTCATGCA
GCGGCTAGTG CCACACCGAA CCCGAATCAT CCGGTTTCAC AAGGTTATGT GCAAATGCTT
GGGGTGTTTA TCGACACCAT GATTTTGTGT ACCTGTACTG CGTTTGTAAT ATTGCTTGCG
GGCGGTTCAT CAAGCGACCA GATGGAAGGG ATCCGTTTAA CCCAAAATGC CATGAGTAGC
CATTTAGGTG GTGGCGGTAC AGAATTTGTT GCAGCCGCTA TCAGCTTATT TGCTTTTACG
TCTGTGGTGG CAAACTATGC TTACGGTGAA AGTAACCTGC ATATGTTCAA GCTTGATAAT
AAACTCGGCA GAGCGTGTTA TACCACAGGT TATTTGGCGA TGATTTTGTG GGGCTCTATG
GCCGCTTTAC CAGAAGTTTG GGCTGCCGCT GATATGGCAC TGGGCTTGAT GACGGTGATT
AACATTATTG CTATCGTCAT GCTTACCCCA ACGATAGTGG CCATTAGTAA AGACTATTTT
GACAAGCACA AAAATGGAAA AAATATGGAA TATCGCACCG GTGATTGTGA AATTCAAGGC
GAGAGCGAAA AAGGTATTTG GGACAAAAGC GAGTAG
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| Protein sequence | MISELVSFIN NILWGDGQVL IYLLIIAGVW FTFKLNFIQL RHFTHMFGVM KGSNKSDKAG
ISSFQALCTS LSARVGTGNL AGVAVAISLG GAGAVFWMWV IALLGMATGF AESVLGQLYK
VRDDNGEYRG GPAYYIQQGL NKRWLAITFA LFLFLGYGFI FSAVQANTIT DALNFAYDIP
TLHSGLVIIG LAALIVVGGL RAIARFAEWV VPFMAVGYVA VTLFVTIMNI DMLPGMLMDI
IKSAFGLQEA GAGALGAAFK NGVQRGLYSN EAGSGSVPHA AASATPNPNH PVSQGYVQML
GVFIDTMILC TCTAFVILLA GGSSSDQMEG IRLTQNAMSS HLGGGGTEFV AAAISLFAFT
SVVANYAYGE SNLHMFKLDN KLGRACYTTG YLAMILWGSM AALPEVWAAA DMALGLMTVI
NIIAIVMLTP TIVAISKDYF DKHKNGKNME YRTGDCEIQG ESEKGIWDKS E
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