| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2562 |
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| Symbol | |
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| ID | 4174317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3106831 |
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| End bp | 3107727 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055579 |
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| Product | HemK family modification methylase |
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| Protein accession | YP_662132 |
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| Protein GI | 109898877 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.429951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC TGCAACGTGC TCTTAGTGGC CACAGTATCG CCGAGCAATT AGCACTGGCA
AAGGCGCAAT TCATTGACAG CGATAGCGCT GCGTTGGATA GCCGTTTGCT CATGTGCCAT
GTTTTACAAT GTGAAACAGC GTACTTGATG ACGTGGCCAG AAAAGCCTTT AGATGAGTTG
CAATTGCGCA CCTATCAGCA ACTAGTTGCA AAACGCAAAA CAGGTTACCC CATCGCTTAT
CTGCTGGGGT ATCGTGATTT TTGGAGCCTG CGTTTACGTG TGTCCCCCGC GACATTGATC
CCCCGCCCTG AAACCGAATT ATTGGTTGAA ACTGTGCTTA ATCTTCCTAT CGCTGAAGAT
GCTCATGTGC TTGATCTTGG CACGGGTACA GGAGCAATCG CCCTTGCGCT GGCCAGTGAG
AAACCCAATT GGCAAGTACT GGGCATCGAT AAAAGTGCTG ATGCGGTGGC ACTTGCTAAG
CAAAATGCCG AGTTAAATTC GTTGCCACAA GTCCGTTTTA TGCAAAGCGA TTGGTTTAGT
GCGCTAGAAC AGACACAACT AGATCAGCAA AACAATCAGC ATAACGTGTT CTCTTTGATC
GTCAGCAATC CGCCTTATGT GGAAGATGAC AGCGTTTACT TGCAACAAGG TGACGTGCGT
TTCGAGCCCG CCAGCGCACT CACATCAGGC AAAGATGGCT TAGACGATAT TCGCATTATC
ATTAGTAAAG CGATAACGTT TTTGCCTAGC GGCGGTTGGC TTGCCTTTGA GCATGGATAT
CAGCAAGCGC AAGGGGTACA AGCACTGCTA GTAAACAATG GATTCGAGCA GGTTCATTCT
GTTAACGATT TAAACGACCT ACCTCGTATT ACGCTTGGGT GTTTAGTCAG CGCTTAG
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| Protein sequence | MSTLQRALSG HSIAEQLALA KAQFIDSDSA ALDSRLLMCH VLQCETAYLM TWPEKPLDEL
QLRTYQQLVA KRKTGYPIAY LLGYRDFWSL RLRVSPATLI PRPETELLVE TVLNLPIAED
AHVLDLGTGT GAIALALASE KPNWQVLGID KSADAVALAK QNAELNSLPQ VRFMQSDWFS
ALEQTQLDQQ NNQHNVFSLI VSNPPYVEDD SVYLQQGDVR FEPASALTSG KDGLDDIRII
ISKAITFLPS GGWLAFEHGY QQAQGVQALL VNNGFEQVHS VNDLNDLPRI TLGCLVSA
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