Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2519 |
Symbol | |
ID | 4174274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3055302 |
End bp | 3056471 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055536 |
Product | hypothetical protein |
Protein accession | YP_662089 |
Protein GI | 109898834 |
COG category | [S] Function unknown |
COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAGT CTATTTCGTT GCAGCAAGGG CGTAAACTTG TATTGCACGC CCAAGGCCTG CCAAGTAAAA GCCGCTCTGG CGATCCGGTA ACCCATTCTT TACACTCCCT AGAAGCCTTG GGGTATGTAC AAATTGATAC CATTAGCGCT GTTGTGCGCG CCCACCACCA TACGTTATGG AATCGAAATC CCCGTTACCA TTGTGACCAC CTAACGCAAC TGATTGCCAA CAAGCAGGCA TTTGAGTATT GGTCCCACGC GGCTGCGTAC CTTCCTATGA AAGATTACCG CTACAGCTTG CTGCGCAAAA ATGCGCTGGC AAACGGTACG CTTGATCATT GGTATCCCAG AAATCCTAAA TTAATGGCTC ACGTGCTCAG GCGCATTCAC GCTGAAGGGC CTTTGATGGC TAAAGATTTC GAGAGTGCAA GTACGGCGTT CAAATCAAAG CCAAAAGACT GGGCGAGTAA ACCTGCCAAA CAAGCGTTAG AGTACTTGTT TATGCAAGGG GATTTGATGA TAAAGGAGCG GGTTAATTTT CATAAAGTAT ATGAGTTAAC CGAACGGGTT TTACCCAGCG ATGTGGATGT ACATCCCCCC AGCGAACAAG ACTATTGGCG TTTTTTGATA ACCCGATTTT TAAGCGCAAA TGGGCTAGGA CAAGCGAGCG AAATAGCTTA TTTGCGCAAG CATACCAAGA CGGGTATAAA ACAAACTATC AATATCATGT TAGAAGCGGG CGAACTCATT GAGCTTGACG TAGCAGGTCT CCGCTATTAT GCGTTGCACA GCCAGCTAGA CGCCCTTAAT ACCCCTATAA AACGCAGTCA GCTGCACATT TTGTCGCCGT TTGATAATTT GCTTATTCAA CGTAAGCGTA TGCAAACCCT GTTTACATTC GACTACTTAT TAGAATGCTA TGTACCTGCC CACAAGAGGC AGTTTGGTTA TTTTTCTCTG CCTATTTTAT GGGACACCAG GCTCGTTGCC AGAATGGATT GTAAAGTCGA TCGAAAAGGC AAGGTCTTGC ACATTCATCA TTTAGTGCTT GAAGCGAGTT TACGTAAGCT CGATGCGTTT CATCAGGCGC TGAATAAAAG CTTGAAAGCA TTTATAGCAT TTAATCACTG CCAAACCTAT CTCTTGCATA AGACTACCCA TTTATCCTAA
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Protein sequence | MLESISLQQG RKLVLHAQGL PSKSRSGDPV THSLHSLEAL GYVQIDTISA VVRAHHHTLW NRNPRYHCDH LTQLIANKQA FEYWSHAAAY LPMKDYRYSL LRKNALANGT LDHWYPRNPK LMAHVLRRIH AEGPLMAKDF ESASTAFKSK PKDWASKPAK QALEYLFMQG DLMIKERVNF HKVYELTERV LPSDVDVHPP SEQDYWRFLI TRFLSANGLG QASEIAYLRK HTKTGIKQTI NIMLEAGELI ELDVAGLRYY ALHSQLDALN TPIKRSQLHI LSPFDNLLIQ RKRMQTLFTF DYLLECYVPA HKRQFGYFSL PILWDTRLVA RMDCKVDRKG KVLHIHHLVL EASLRKLDAF HQALNKSLKA FIAFNHCQTY LLHKTTHLS
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