Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2493 |
Symbol | ihfA |
ID | 4174247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3025779 |
End bp | 3026075 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055509 |
Product | integration host factor subunit alpha |
Protein accession | YP_662063 |
Protein GI | 109898808 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.044668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTAA CCAAAGCCGA AATGGCGGAA CATTTATTTG AAAAGTTGGG CATGAACAAG AGAGATGCCA AAGATCTTGT TGAAGCATTT TTCGAAGAGG TCCGTGAGGC ATTGGAATCA GGTGAGCAAG TTAAGCTATC TGGTTTTGGT AACTTTGATT TACGACAAAA GAGTGAACGA CCAGGGCGCA ACCCTAAAAC GGGTGAAGAT ATCCCTATTA AGGCGAGACG CGTAGTCACA TTTCGACCTG GTCAAAAGCT CAAAAGCCGC GTAGAGAATA CAAAACCGAC TGAGTAA
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Protein sequence | MALTKAEMAE HLFEKLGMNK RDAKDLVEAF FEEVREALES GEQVKLSGFG NFDLRQKSER PGRNPKTGED IPIKARRVVT FRPGQKLKSR VENTKPTE
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