| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2482 |
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| Symbol | |
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| ID | 4174236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3015105 |
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| End bp | 3016571 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055498 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_662052 |
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| Protein GI | 109898797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA CATCCCCAAT TTACAAAAAA GCATTGCTTA GTTTGGCTGT ATCGCTTGGT
ATTATGACGA GCGCTACCGG CTTTGCTGCT AACCAAAAGA ATGCTTTGCC CGAAATAGGT
GTCGTTGCTT CAAGTGCCAT TAGCTTGGAC AAAGAGATGC AAATTGGTGA TGTGTTGATG
CGTCAACTGC GAGGTCAGGC CCCTATTATT AATGACCCTC TCCTTGATGA ATATATTCAA
GATTTGGGTA ACCGCTTGGT TGCCCAAGCC GATAATGTTA AATTTCCGTT TGAGTTTTTC
CTACTTAATA ATGCCGATAT TAACGCGTTT GCTTTTTTCG GCGGTCACGT AGGTGTGCAC
ACAGGTTTGA TTTTTAATGC GCGAAACGAG AGTGAACTAG CCTCAGTACT CGCCCACGAG
GTCAGCCACG TTACCCAGCG GCACATCGCC AGAAGTATCG CCGCACAACA AAAATCGTCA
CCTTTACAGT TAGCGTCGGC CTTAGGAGGT ATTTTACTTG CTCTAGCCAA CCCAGAAGCG
GGTATTGCCG CCATTAGTGC GGGCTCCGCT GCATCGGCAC AATCCTCAAT CAATTACACT
CGCCAAAATG AAAAAGAGGC GGATAGCATA GGTATTCGCA TACTCGCGCA AGCAGGTTTC
GACCCAAACG CTGCCGGCGA GTTTTTCGGT ACATTAGTGG AAAAATACCG CTTAAAATCT
AAACCACCTG CTTTTTTGTT AACTCACCCC TTGCCTGAAT CTAGGGTTGC AGACGCCCGT
ACACGTGCTG CAAGTTATCG CACAGCAAGA GTGGCCCCAA GCTTGAGCTT CCATCTTGCC
AAGAGCCGTA TTTTAGCGCG GTATTACGCA ACGCCCGAAT ACAACGTCAG TTATTTTGAA
ACCAGTTTAG AGCGTGGTAG CTATACGTTT AAAACCGCGT CAGAGTATGG CCTAGCCTTG
GCTTACTTAG CAGATAAACA GTACGATAAA GCCCGTGATC TCATCGATGG TTTGCTAAAG
GATGATCCAC GTAATTTGTT TTATCTCGAT ACCTATACAG ACATTGCACT TGAGACTGGG
CGTGTCCAGG ATGCCATCGA CAAACTCACG ACCCAAGCAG TGTTAACACC CCGCAATCGC
GTGATCACAC TGAATTTAGC CAATGCGTTG GTTAAAAATA AGCAATATGA TCGTGCTGTA
CGCATATTAA AAGATTACTT ATTGGTCGAA CCTGACAACA TGCTCGCCCA TCAAATATTG
TCTGACGCTT ATGCAGAAAG TCAGAACAAG TTGGAGATGC ATCAGACCAA AGCTGAAGTC
TACGCATTGG CAGCGTCCTA TCCTCGCGCC ATAGATGAAT TACACAGTGC GTATAATTAC
GCAGGTGCGC AAAACATTGA AAAGCAAAGA ATACGCGCCC GAATCGAGCA GTTTCGTGAG
TTTCAAACGC GTTTAGAGAG TCTTTAA
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| Protein sequence | MIKTSPIYKK ALLSLAVSLG IMTSATGFAA NQKNALPEIG VVASSAISLD KEMQIGDVLM
RQLRGQAPII NDPLLDEYIQ DLGNRLVAQA DNVKFPFEFF LLNNADINAF AFFGGHVGVH
TGLIFNARNE SELASVLAHE VSHVTQRHIA RSIAAQQKSS PLQLASALGG ILLALANPEA
GIAAISAGSA ASAQSSINYT RQNEKEADSI GIRILAQAGF DPNAAGEFFG TLVEKYRLKS
KPPAFLLTHP LPESRVADAR TRAASYRTAR VAPSLSFHLA KSRILARYYA TPEYNVSYFE
TSLERGSYTF KTASEYGLAL AYLADKQYDK ARDLIDGLLK DDPRNLFYLD TYTDIALETG
RVQDAIDKLT TQAVLTPRNR VITLNLANAL VKNKQYDRAV RILKDYLLVE PDNMLAHQIL
SDAYAESQNK LEMHQTKAEV YALAASYPRA IDELHSAYNY AGAQNIEKQR IRARIEQFRE
FQTRLESL
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