| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2480 |
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| Symbol | bcp |
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| ID | 4174234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3013167 |
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| End bp | 3013631 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055496 |
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| Product | thioredoxin-dependent thiol peroxidase |
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| Protein accession | YP_662050 |
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| Protein GI | 109898795 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.813265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGAC TGACAGCGGG TGCACCAGCA CCTAAATTCT CCTTGCCCAA TGAGCACGGC
GAAACCGTGA ACCTATCGGA CTTTAGCGGT AAAAAGGTAT TGGTGTATTT CTACCCCAAA
GCCATGACGC CAGGCTGCAC TGTACAAGCT CAAAATCTTC GTGATAGCAA AAGCGAACTA
GATAAGCTAA ATGTAGTTGT GCTTGGCGTC AGCCCAGACG CGGTCAAGCG CCTGCCTAAA
TTCATTGAAA AAGAGCAGCT TAATTTCAGC CTGTTGTCTG ATGAAGATCA TGCTGTTGCG
GAGGCCTTTG GCGTTTGGGG CTTAAAGAAG TTTATGGGCA AGGAATATGA CGGTATTCAC
CGCATCAGCT TTCTAATTAA CGAACAAGGC GTGATTGAAC ACGTGTTTGA TAAGTTTAAA
ACCAAAGACC ACCATCAGGT CGTACTTGAT TATTTAAATC AATAA
|
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| Protein sequence | MNRLTAGAPA PKFSLPNEHG ETVNLSDFSG KKVLVYFYPK AMTPGCTVQA QNLRDSKSEL
DKLNVVVLGV SPDAVKRLPK FIEKEQLNFS LLSDEDHAVA EAFGVWGLKK FMGKEYDGIH
RISFLINEQG VIEHVFDKFK TKDHHQVVLD YLNQ
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