| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2470 |
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| Symbol | |
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| ID | 4174224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3000593 |
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| End bp | 3003286 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055486 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_662040 |
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| Protein GI | 109898785 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.931023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC ACGCCCAAGA AATTCTTCCT ATTAATATTG AAGAAGAACT TAAAAATTCT
TATCTTGATT ACGCCATGAG CGTAATTGTA GGCAGGGCGC TGCCTGATGT AAGAGATGGC
TTGAAGCCCG TGCATCGCCG GGTTTTGTTC GCTATGAACG AGCTGAAAAA CGATTTTAAC
AAACCCTATA AAAAATCGGC ACGTGTTGTC GGTGATGTTA TCGGTAAGTA CCACCCACAT
GGAGACTCGG CTGTTTACGA TACCATCGTA CGTATGGCTC AGCCGTTTTC TTTACGTTAC
ATGCTGGTAG ATGGTCAAGG TAACTTCGGT TCTGTTGATG GTGATTCAGC CGCTGCAATG
CGTTACACCG AAATTCGTAT GGCGAAAATT TCCCATGAAT TATTAGCGGA TTTAGAAAAA
GAAACCGTCG ACTTCGTTCC GAATTACGAC GGTACCGAAT TCATCCCTGA CGTACTGCCC
ACTAAAGTAC CCAACCTATT AATCAATGGT TCTTCAGGTA TTGCTGTTGG TATGGCGACT
AACATTCCTC CTCACAACTT AACCGAAGTT GTGAACGGGT GTATCGCGTT AATTGATAAG
CCTGAGCTTT CCATTGAAGA ATTGATGGAA TATATCCCAG GCCCAGATTT CCCGACCGCT
GCCTTTATAA GTGGTCGTAA GGGTATTGAA GAAGCGTACC GTACGGGGCG TGGAAAAATA
TATATGCGCG CCCGCGCAGA GATTGAGCGC GAAGACAATG GTAAAGAAAC CATAGTCGTT
CACGAAATTC CTTATCAGGT CAACAAAGCG CGCCTAATTG AAAAGATAGC CGAGCTGGTA
AAAGAAAAGA AAATTGAAGG CATTTCAGCC CTACGTGATG AGTCTGATAA AGACGGCATG
CGTATTGTAG TTGAAGTGAA ACGTAACGAG TCAGGTGAAG TCTTACTGAA CCACTTATAT
TCACAAACAC AGATGCAAAC CGTGTTTGGG ATCAACATGG TGGCACTGGA TAAAACTCAG
CCTAAAGTGT TCAATTTACT TGAGATACTG CAAGCCTTCG TTTTACACCG CCGCGAAGTG
GTCACACGCC GTACGGTTTT CGAACTGAAG AAAGCCCGTG AGCGTGCTCA TATTCTTGAA
GGTTTAGCGA TTGCTTTGGC TAATATAGAC CCGATAATCG CACTGATTAA AGCGTCTAAA
AGCCCGTCTG ATGCCAAAAT ATCATTGACG GCTCAAGGTT GGGCGTTAGG CGATGTGTCT
GACATGTTAG AGCGTGCCGG TAATGACGCC GCTCGTCCTG ATTGGTTAGA GCCCGAGTTT
GGTATTCGTG ATGGCTTGTA CTATTTAACA GAGCAGCAAG CACAAGCAAT CCTTGACTTA
CGTTTGAATA AATTAACGGG TCTTGAGCAC GAAAAAATTC TTTCTGAGTA CAAAGAGTTA
TTAGACTTGA TTGCAGAATT ACTGCATATA TTAGGTAGCC CTGAGCGCTT GATGGAAGTC
ATACGTGAAG AGCTTGAAAA AATTCGTGAT GAATTCGGTG ATGAGCGCCG CACTGAAATC
ACTGCCGCAT CTCACGATAT CGATATTGAA GACTTGATTG AACGTGAAGA GGTTGTGGTG
ACGCTATCTC GTGAAGGTTA CGTAAAGTAT CAAAAGCTAA ACGATTACGA GTCGCAGCGC
CGTGGTGGTA AAGGTAAATC AGCGACCAAG ATGAAAGAAG AAGATTTCAT CGAGAAGTTA
CTGGTGGCCA ATACCCATGA CCACATTTTG TGCTTCTCTA CTCGCGGCCG ATTGTATTGG
CTAAAAGTAT ACCAATTGCC ATTAGCGAGT CGTAATGCAC GCGGTCGTCC AATTGTGAAT
ATTTTACCGT TGGAAGCAAA TGAACGTATC ACTGCGATTT TGCCTATTCA AGAATTTGAA
GAAGGTAAAT ACGTCTTAAT GGCTACGGCT AATGGTACGG TGAAGAAAAC GGCCTTGGTC
CAGTACTCAC GCCCACGTGC AAACGGTATT ATCGCGGTCA ACTTGAACGA CGGTGATGAG
TTAATCGGTG TTGATATTAC CGACGGTAGC AGTGATATCA TGTTGTTCTC GGATGCGGGT
AAAGTCGTTC GCTTTAATGA GAAAGCGCGT GATTCAGAAA CAGGGGCAGT TAAAATTGAT
CCTGAAACTG GCGAAGAAAT CCTAGCACTA CGTCCAATGG GGCGCACAGC AACAGGTGTT
CGTGGCATAC GCTTACAAGA TGGCCAAAAA GTGGTGTCGT TGATTGTACC TCAAGGTGAT
GGCGCGATTT TAACCGCCAC CGAAAATGGT TTCGGTAAAC GTACCCCTGT CGAAGATTAC
CCAGCGAAAA GCCGTGCCAC GCAAGGTGTG GTATCCATTA AGGTTTCAGA GCGTAACGGT
AAGGTCGTCG GTGCTGTACA GGTCAATGAC AGCGATGAAA TCATGCTGAT CAGTGACCAA
GGTACTTTAG TACGTACTCG CGTCGGTGAA GTCTCTACCG TGGGTCGTAA CACTCAGGGC
GTACGCTTAA TACGGACCGG AGAGGACGAA CATGTTGTAG GTCTGCAGCG CATCGATGAA
GTTGAAGAGT TAGAAGAAGA ACTAGAGGCG TTAGCTGAAG GTGACGAGAC AGTCGAAGCC
GCAGCATCAG ACGTGGATAA CACCACGGAT GAAGATCCTC AAAACGAAGA GTAA
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| Protein sequence | MTDHAQEILP INIEEELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMNELKNDFN
KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SVDGDSAAAM
RYTEIRMAKI SHELLADLEK ETVDFVPNYD GTEFIPDVLP TKVPNLLING SSGIAVGMAT
NIPPHNLTEV VNGCIALIDK PELSIEELME YIPGPDFPTA AFISGRKGIE EAYRTGRGKI
YMRARAEIER EDNGKETIVV HEIPYQVNKA RLIEKIAELV KEKKIEGISA LRDESDKDGM
RIVVEVKRNE SGEVLLNHLY SQTQMQTVFG INMVALDKTQ PKVFNLLEIL QAFVLHRREV
VTRRTVFELK KARERAHILE GLAIALANID PIIALIKASK SPSDAKISLT AQGWALGDVS
DMLERAGNDA ARPDWLEPEF GIRDGLYYLT EQQAQAILDL RLNKLTGLEH EKILSEYKEL
LDLIAELLHI LGSPERLMEV IREELEKIRD EFGDERRTEI TAASHDIDIE DLIEREEVVV
TLSREGYVKY QKLNDYESQR RGGKGKSATK MKEEDFIEKL LVANTHDHIL CFSTRGRLYW
LKVYQLPLAS RNARGRPIVN ILPLEANERI TAILPIQEFE EGKYVLMATA NGTVKKTALV
QYSRPRANGI IAVNLNDGDE LIGVDITDGS SDIMLFSDAG KVVRFNEKAR DSETGAVKID
PETGEEILAL RPMGRTATGV RGIRLQDGQK VVSLIVPQGD GAILTATENG FGKRTPVEDY
PAKSRATQGV VSIKVSERNG KVVGAVQVND SDEIMLISDQ GTLVRTRVGE VSTVGRNTQG
VRLIRTGEDE HVVGLQRIDE VEELEEELEA LAEGDETVEA AASDVDNTTD EDPQNEE
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