Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2459 |
Symbol | |
ID | 4174213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2987635 |
End bp | 2988276 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638055475 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_662029 |
Protein GI | 109898774 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00395649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTG TTAAATATAT CGGTTACGTG GCGAAGTTAT CAGGGACTTT ATTGCTAATG TTAGGGGCTA TTTTTAGCGT AAATGCCCAG CAAACCGATG AAGATAAACT GAAAGCGCGA TTGCAAACCC TACATAACTT TAGCGCCTCG TTTACCCAAA AAGTGACTGA CGCGAATCAC GAAGTACTGC AAGAAGCAAC TGGGGTGATA AAGCTAAAAC AACCCAACAA ACTATATTGG GAGCTCAACC CGCCCAATGA AAATATTCTC ATTGCCGATG GCAGTACTCT ATGGAATGTG GACCCTTTTG TGGAGCAAGT TACTGCCATC AGTCAAGACC AAGCAGTGGC CAATAATCCC CTTATTTTGC TCACTCAGCC GAACAGTGAC GCTTGGGAGA ATTTCAGTGT TTCTCATACC AATGATACTT TTCGTATTGA TGCGAAAAAA CCTGATTCTG CAGTACACTC ACTCGTGTTG GTGTTTGATG GGGCACAGTT AACGTCGATG AGCATGCAAG ACAGCCAGCA GCAAATTAGC GACTTGTATT TCAATGATAT TCAGCAAAAT AAAACGGTCA GTGATGAGGT CTTTACCTTT AGTCTGCCTG AAGGCTACGA CTTGGACGAC CAACGTAACT GA
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Protein sequence | MNSVKYIGYV AKLSGTLLLM LGAIFSVNAQ QTDEDKLKAR LQTLHNFSAS FTQKVTDANH EVLQEATGVI KLKQPNKLYW ELNPPNENIL IADGSTLWNV DPFVEQVTAI SQDQAVANNP LILLTQPNSD AWENFSVSHT NDTFRIDAKK PDSAVHSLVL VFDGAQLTSM SMQDSQQQIS DLYFNDIQQN KTVSDEVFTF SLPEGYDLDD QRN
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