| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2456 |
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| Symbol | |
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| ID | 4174210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2984605 |
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| End bp | 2985903 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055472 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_662026 |
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| Protein GI | 109898771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00287072 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATG CTAAGTATTT ACGTAACGAT ATAAACATTG CGGCGCAAAA ACTCGAAAAA
CGAGGTTACA CCCTTGATGT TGCTCAGTTC ACAGCACTAG AGGAAAAGCG CAAATCTTTA
CAGATGCGCA CTCAAGAACT ACAAAATGAA CGCAATGTAC GCTCCAAGTC TATCGGTAAA
GCGAAAGCAT CAGGTCAAGA TATTGAGCCT TTGCTTGCAC AAGTCGGCCA ACTTGGTGAT
GAGCTTAATG CGGCCAAAGC CGAACTGACA GGCTTGCTAG ATGAAATTCA GACGCTGACT
TTGAATATTC CTAACTTGCC TGACGACAGT GTGCCTGAAG GCAAAGATGA AGACGAGAAT
GTAGAAGTGT CTCGTTGGGG CACGCCTCGG GAGTTTGATT TTGAAGTCAA AGATCACGTT
GATTTAGGTG CTGGTGTCGC CAACGGTTTA GATTTTGAAA CCGCCACTAA GTTAACCGGC
TCTCGTTTTG TGGTGATGCG TGGCCAAATA GCGCGTTTAA ACCGAGCCAT TGCTCAGTTC
ATGCTTGATT TACACACAGA GCAGCATGGT TATCAAGAAA TGTACGTGCC GTATTTAGTG
AACGAAGAAA GCATGTTAGG TACAGGTCAA TTTCCTAAGT TTGTAGGGGA TGCTTTTCAC
ACCAAACCCG CAACCGAAGA AGGTCAAGGC TTGTCCTTGA TACCCACGTC AGAAGTGCCG
TTAACCAATA TTGCACGTGA CTGTATTTTT GCAGCCAATG AATTACCGAT TAAAATGACG
GCGCATACTC CTTGCTTTAG AAGTGAAGCG GGGTCATATG GTCGTGATAC TCGTGGTCTT
ATTCGTCAGC ATCAATTCGA TAAAGTGGAG ATGGTGCAAT TGGTCGAAGC GGACAAATCA
TTCGAAGCTC TAGACGAATT AACTGGCAAC GCTGAAAAAG TACTTCAGTT GCTTGAATTG
CCCTACCGTA AGATGTTGTT GTGTACCGGC GATATGGGCT TTGGTGCATG CAAAACATTT
GATTTAGAAG TGTGGTTACC CGCACAAGAT ACCTATCGTG AAATTTCGTC TTGCTCAAAC
ATGCTTGATT TCCAAGCGCG TCGTATGCAA GCACGTTACC GCGACCCGCA AACGAATAAA
ACCGAGTTGC TACATACGCT AAATGGTTCA GGGTTGGCAG TAGGACGCAC GCTAGTGGCC
ATTTTGGAAA ACTACCAGCA AGCCGATGGC AGCATTACCA TTCCTGAAGT GCTTCAGCCT
TATATGAATG GTGTAACTGT GATTGGTGCC GTTAAATAG
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| Protein sequence | MLDAKYLRND INIAAQKLEK RGYTLDVAQF TALEEKRKSL QMRTQELQNE RNVRSKSIGK
AKASGQDIEP LLAQVGQLGD ELNAAKAELT GLLDEIQTLT LNIPNLPDDS VPEGKDEDEN
VEVSRWGTPR EFDFEVKDHV DLGAGVANGL DFETATKLTG SRFVVMRGQI ARLNRAIAQF
MLDLHTEQHG YQEMYVPYLV NEESMLGTGQ FPKFVGDAFH TKPATEEGQG LSLIPTSEVP
LTNIARDCIF AANELPIKMT AHTPCFRSEA GSYGRDTRGL IRQHQFDKVE MVQLVEADKS
FEALDELTGN AEKVLQLLEL PYRKMLLCTG DMGFGACKTF DLEVWLPAQD TYREISSCSN
MLDFQARRMQ ARYRDPQTNK TELLHTLNGS GLAVGRTLVA ILENYQQADG SITIPEVLQP
YMNGVTVIGA VK
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