| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2448 |
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| Symbol | |
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| ID | 4174200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2977132 |
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| End bp | 2977704 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055462 |
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| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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| Protein accession | YP_662018 |
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| Protein GI | 109898763 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00848098 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGACTA TCCCTAATAT CATCACAGTG CTCCGGGTTT TACTGATACC GATTTTTGTC
GCTGTGTATT TTCTTGATTG GCAGTGGGCG CATCAAGCCG CTGCATTTGT TTTTTGGTTC
GCAGCCATCA CCGATTGGTT TGACGGCTAC TTAGCCCGTA AATTGCAACA GTCTACCGCA
TTTGGTGCTT TTTTAGACCC AGTGGCTGAC AAGCTCATTG TCGCAACGGC CCTCGTGTTA
ATTACCCACA CCTACGCCAC CATCTGGATA ACCATTCCAG CGATTTTACT ATTAGCCCGA
GAAATATATA TTTCAGCACT ACGCGAATGG ATGGGCCAAA AAGGGATGCA AGATACCGTC
AAAGTTTCGT TTATGGGTAA AGCGAAAACG ATGGCACAAA TGTTAGCCTT GATAGGTTTA
CTCTCGGAAT TGCAGTATTT TATGGGAATT CCCATTTATT GGGTCACCCT GGGTTACATA
TTATTGTACT TCGCGGCGGT TTTATCTTTC TGGTCGATGA TTTCTTACAC ACTTGCAGCA
TGGCCTTCAT TATCAAAATC AGAGAAGAAA TAG
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| Protein sequence | MWTIPNIITV LRVLLIPIFV AVYFLDWQWA HQAAAFVFWF AAITDWFDGY LARKLQQSTA
FGAFLDPVAD KLIVATALVL ITHTYATIWI TIPAILLLAR EIYISALREW MGQKGMQDTV
KVSFMGKAKT MAQMLALIGL LSELQYFMGI PIYWVTLGYI LLYFAAVLSF WSMISYTLAA
WPSLSKSEKK
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