| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2417 |
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| Symbol | |
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| ID | 4174166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2939403 |
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| End bp | 2940803 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055428 |
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| Product | putative nitrate transport protein |
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| Protein accession | YP_661987 |
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| Protein GI | 109898732 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATA ACAGATTGTT AAACTCGCTT GTACATACCG TGAAATCGCT TCGTTTTGCA
ATGATTTCAG CAGTGTGCAC AACAACGTTA GTTGGGCAGG GTGTGTCGGC ACAAGAGTTA
GGATGGCCAG AAAAAGAAGA ACTAAAATTC GGCTTCATTA AACTTACCGA CATGGCGCCG
TTGGCAATAG CTTATGAGAA AGGCTACTTC GAAGATGAAG GCTTGTACGT CACATTGGAA
GCACAAGCAA ACTGGAAAGT GCTACTCGAC CGCGTCATTG ACGGTCAATT AGATGGGGCG
CATATGCTCG CGGGGCAACC ATTAGGGGCA ACCATAGGGT ATGGCACAAA GGCGGACATC
ATTACCGCCT TCAGCATGGA CTTAAACGGA AATGCCATTA CGGTTTCGAA TGATATTTGG
CAGCAGATGA AGCCAAATAT TCCCAAGGAG AACGGTAAAC CAGTCCATCC TATTAAAGCC
GATGCCCTTA AACCGGTTGT TGATAGTTAC AAAAAACAAG GTAAAGCATT CAAAATGGGC
ATGGTATTCC CCGTGTCCAC TCACAACTAT GAGCTGCGTT ATTGGTTAGC CGCTGGCGGT
ATTCATCCGG GATATTATGG GCCGAATAAT GACGTGAAAG GCCTGATTAA TGCCGATGCT
CAATTATCGG TTACTCCACC ACCACAAATG CCGTCCACCA TGGAAGCCGG CACTATTTAT
GGTTACTGCG TGGGTGAGCC GTGGAACCAG CAGGCGGTGT TTAAAGGCAT AGGCGTGCCG
GTGGTTACCG ATTACGAAAT TTGGAAAGAC AATCCTGAAA AAGTGTTCGG GGTAAACAAA
GCATGGGCAG AAGCAAACCC AAATACCCAT ATTCGTGTGG TAAAAGCGAT GATCCGCGCG
GCTATATGGT TAGATGAGAA AGACAATGCT AACCGTCCTG AAGCGGTACA AATTCTAGCG
AAAAGCCAGT ATGTAGGGGC TGATGCAGAG GTGATTGGCA ACAGCATGAC CGGCACCTTT
GAATATGAAA AAGGCGATAA GCGCTCAGTG CCAGATTTCA ACGTGTTCTT TCGCCACAAT
GCCACCTATC CCTATTACAG TGATGCTATT TGGTACTTAA CGCAAATGCG TCGTTGGGGC
CAAATCAGTG AGCAAAAATC TGATGATTGG TACAAAAACA TCGCTAAGCA AGTGTATCGC
CCTGATATTT ATGCTCAAGC GGCGAAGTCA TTGATTGCTG AAGGGAAAGC AAACGCAGCG
GATTTTCCCG AATTTGCCAG CGAATCAGGC TTCAAAAAGC CACAAACACA CTTTATCGAC
AATATCGTTT ATGACGGCAG TCAGCCTAAT GCTTATCTTG AAAAGTTCGA GATTGGCTTA
AAAGGCGACA GCAAAATTTA A
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| Protein sequence | MVNNRLLNSL VHTVKSLRFA MISAVCTTTL VGQGVSAQEL GWPEKEELKF GFIKLTDMAP
LAIAYEKGYF EDEGLYVTLE AQANWKVLLD RVIDGQLDGA HMLAGQPLGA TIGYGTKADI
ITAFSMDLNG NAITVSNDIW QQMKPNIPKE NGKPVHPIKA DALKPVVDSY KKQGKAFKMG
MVFPVSTHNY ELRYWLAAGG IHPGYYGPNN DVKGLINADA QLSVTPPPQM PSTMEAGTIY
GYCVGEPWNQ QAVFKGIGVP VVTDYEIWKD NPEKVFGVNK AWAEANPNTH IRVVKAMIRA
AIWLDEKDNA NRPEAVQILA KSQYVGADAE VIGNSMTGTF EYEKGDKRSV PDFNVFFRHN
ATYPYYSDAI WYLTQMRRWG QISEQKSDDW YKNIAKQVYR PDIYAQAAKS LIAEGKANAA
DFPEFASESG FKKPQTHFID NIVYDGSQPN AYLEKFEIGL KGDSKI
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