| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2414 |
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| Symbol | |
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| ID | 4174163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2935998 |
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| End bp | 2937230 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055425 |
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| Product | putative lipoprotein |
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| Protein accession | YP_661984 |
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| Protein GI | 109898729 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0286985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC ACATCGTAAA ACTTAACAAA AAGAAATCTG CACTTGCGCT AATGGTTGGG
TTGGTATGTG CTGGGGCGAC CATGGGACAG GCACATGCAG CAGAGCAAAG CAGCATTACC
AGCGCCTTAA AAGAAGGCAC TGCAGCGGTT AACCTGCGAT TGCGCTACGA AGATGTTGAT
CAAGATACTA ACGATGCCAG TGCATTAACC TTGCGCACCA TGCTTAATTA TACCACTGAT
AGCTACAAGG GTTTTTCAGC CAAAATTGAA GTTGAAGACA CACGCATTGT ATTGGGGCAG
GGCGACTACA CCGTTGGCCC AAGTGGCTAT AATCCTGGGC AATATTCGGT TATCGCCGAT
CCAGAGCATA CAGAGCTTGA TCAAGGCTAC GTGCAATACC AAAACGCCGG CGTCACGGCA
AAGTTTGGTC GTCAAATTAT CACCATGGAC AATCACAGGT TTGTGGGGCA TGTAGGGTGG
CGTCAAGATT GGCAAACGTT CGACGGGGTG AGCGTAAAAT ACGTGGCCAA TAAAGATTTA
ACCTTAAACT ACGCTTATTT AAGCCAACGT AATCGTATCT TTGGCCAAGA CGCTGATTTA
GACAGCAAAG ATCATCTCTT CAATGTTGGG TACAACACCG CATTAGGAAA ATTAGTGGGC
TACAGCTACT TGTTAGAAGT TGATAACGAC ATTGACAATT CACTAGATAC CTATGGTTTT
AGCTTTAATG GCGGCACGAA AATAGCAGAT ACTTCAGTGT TGTACGGCAT TGAATATGCC
ACCCAGAGTA GCGAAACCGC CACCACTGAT TTTGACGCTG ATTACTTGAT GCTAGAAGCA
GGGGTGAAAC TGTCGGCAGT GACCTTAAAA CTTGGTTACG AGTCACTGGG CTCTGACGAT
GGCGCATATG GCTTTTCGAC GCCACTTGCT ACTCTGCACA AATTCAATGG ATGGGCTGAC
ACCTTCTTGA GTACCCCAGC TGAAGGGCTG GTGGATGTGA GTGTATCTGC ATCCGGCAAG
TTGGCAGGTG GTGGATGGTC TGTGATTTAT CATGATTTCA GTGCCGATAA GGACTCAAGC
ACGGTTGATG ATTTAGGCAG TGAGATTGAT TTCAGTTATG TGCGTAAATT TGAAGGCGGC
TATGCCACGG GTATCAAATA CGCTGCTTAT TCAGGGGACA GTGGCCGTCA AGATACTGAT
AAGTTGTGGG TTTGGGCAAG TGCTGCATTC TAA
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| Protein sequence | MSTHIVKLNK KKSALALMVG LVCAGATMGQ AHAAEQSSIT SALKEGTAAV NLRLRYEDVD
QDTNDASALT LRTMLNYTTD SYKGFSAKIE VEDTRIVLGQ GDYTVGPSGY NPGQYSVIAD
PEHTELDQGY VQYQNAGVTA KFGRQIITMD NHRFVGHVGW RQDWQTFDGV SVKYVANKDL
TLNYAYLSQR NRIFGQDADL DSKDHLFNVG YNTALGKLVG YSYLLEVDND IDNSLDTYGF
SFNGGTKIAD TSVLYGIEYA TQSSETATTD FDADYLMLEA GVKLSAVTLK LGYESLGSDD
GAYGFSTPLA TLHKFNGWAD TFLSTPAEGL VDVSVSASGK LAGGGWSVIY HDFSADKDSS
TVDDLGSEID FSYVRKFEGG YATGIKYAAY SGDSGRQDTD KLWVWASAAF
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