| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2358 |
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| Symbol | |
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| ID | 4172512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2870436 |
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| End bp | 2872619 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055366 |
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| Product | Ig-like, group 1 |
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| Protein accession | YP_661928 |
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| Protein GI | 109898673 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00702146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC GCACAAGATT GCTTTTAAGC AGCTTTATAT TGTTTACTTT ATTTGCCTGT
GGGGGAGGCG GCTCTGATTC AATCACCAGG GGCGAGACAC CTAACTCAGG TGATAACCCA
AGCGACACCA CTACCTATTC AATTGCCCTA ACCTTAACAG ATTCAAACCA GCAAACTGCT
TCGCAACTAA GTGCGTCTAC CCCGCTAACG CTAACTGCTC GGGTAACCGA CAATACAGGG
GCTATCGCGA CAGATAAGCT TGTCACCTTT ACCTTCAGCC CAGAAGGCTT AGCTGATTTT
AATAATGACT CAGGTACTGC TTCAACCGGC ACAACAGGTG AGGCCAGCAT AACCTTATTG
GTGGGGGGGA GCTCAGGCTC TGGAGAGGTT ATAGCAACCC TCACTGGCGG AGAGTCAGCT
AGCACAACCT TTACCTCACA AGGCACTACA CAAGTGAATG AGCAGCCCAG CTCGCTCGAC
TTATTTGCAG GTGCAGTACA ATTGCCTTCA AGCGGCACCG ACAGCATAGC GCTAATCGCA
CTGCTTAAAA ATGCGCAAAA CGTTTTGATG GAAGGAGTTG ATGTGGTGTT CTCAGCTGAT
GCTGACGCGG CGTTACTGAT TACGCAGGGC ACAACAGGCA ATGATGGCCA AGCAACGGCG
TCATTGACGA CGCAAAATAA CCGTCAGAAT CGTGATATTC AAGTGACAGC CACAAGCGGC
ACATTGAGCC AGACTTTATT GATATCTGTT ATAGGCACCA CGGTGAATAT TGATGGTCCA
AGTTCAGTCA TATTGAACGA CCCCGTTGAT TTAACCATTA GCTTACTTGA CTCAGATGGC
AATGGTATAG CCAATCAGCA GGTTAACTTA TCGGCTGCTA ACGGGCTGTT AAGCACCACC
ACACCGACGA CAGGCACCAA TGGTCAAGTC ACTGTTACTT ATACGGGCAA TACATCTGGA
GTTGAAACGA TTTCGGCCAG TGCCCTAAAC GATGAGAGTG AATTCACCTT GGCGGTTCAA
GCGGATAACT TTAGTTTCAC CAGTGTACCT ACTGAAGAAG TTAACCTGAA CGACGCTCAG
TCCCTTGGGT TAACGTGGTT ATCAAACAAC ATTGCGGTAT CGGGTGCTCA AGTAACGTTG
ACCACCTCAA GAGGGGCCAT AGCCACGCGC ACTAAAAATA CTGATAGTGA TGGCTTAGTG
AGTTTCTCTA TCTCATCTGA TAATGCGGGG TTTGCAACGG TTTCAGCGAC GGGCACGGAC
AGTGGCGGCA ATCAAGTGAC GGCGCGCACT CAAATAGAAT TCGCTGCGAC GGTAGCGGAT
AACATCATAG TGGATGCCAC ACCTGACTCT ATCGGCCCCA CAGGTGAAAT TAGTACCATT
AGCGCAGTGG TGCGCGATGC TCGAGGCAAT TTGGTCAAAG GCAAAACCAT TAACTTTTTA
CTGGATGATG TGAGCGGTGG GCAAATTTCA CCGAATCAAG CCACAACAGA TAGAAGCGGC
ATTGCGAAAA CGGTGTATAC CTCAAATGCA TTAAGCACAT TTGAAGGGGT GAAGGTGTAC
GGCACAGTAG ATGATACCCA AAGCGTGTCG GCCTTCACTT TGCTAACGGT GGGTGACAAG
CCGTTCGATA TCGTCTTTGG TACGGGCAAT ACCATTCAAT CGCCCACTGA ATCATCTTAC
ACAAAAGAGT TCTCAGCATT TGTAACCGAC CCTGATTCTA ACCCGGTGGA AAATGCCAAC
ATTACCTTTT CAGCGCCGCC AAAGCCTTTC AAACAAGGGG GAACGTACGA GAAAGGATTC
TGGATGTTTA ATACCACTAC TAACATCTGG AATAAAAATG TTACGGCGGT GTGTGATAAC
GAAGATGTTA ACGGAAATGG TATTCTTGAC GAAGGTGAAG ATATAAACGG TGATGAACAA
TTAACACCTG GCAACGTTGT AGCAGTTCAA TCTCAGGGGA CGACGGATGA AAATGGCCAG
GTAGTATTTA CCCTTAGTTA TCCAAAAGCG TTTGGAGCAT GGACAACCGT ATCCATTACC
GCTAACGGTG AATCTCAAGG CAGCGAGTCA TCTGAGCAAC ATGATTATGG TTTAGGCGTA
GCAGCGGACG ATTTAACAGA CTCAGCGTCA GCACCTCCCG CAAATCCTTA TGGTGAGTCA
GCCAACTGCA ACGACATTTT ATAA
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| Protein sequence | MYQRTRLLLS SFILFTLFAC GGGGSDSITR GETPNSGDNP SDTTTYSIAL TLTDSNQQTA
SQLSASTPLT LTARVTDNTG AIATDKLVTF TFSPEGLADF NNDSGTASTG TTGEASITLL
VGGSSGSGEV IATLTGGESA STTFTSQGTT QVNEQPSSLD LFAGAVQLPS SGTDSIALIA
LLKNAQNVLM EGVDVVFSAD ADAALLITQG TTGNDGQATA SLTTQNNRQN RDIQVTATSG
TLSQTLLISV IGTTVNIDGP SSVILNDPVD LTISLLDSDG NGIANQQVNL SAANGLLSTT
TPTTGTNGQV TVTYTGNTSG VETISASALN DESEFTLAVQ ADNFSFTSVP TEEVNLNDAQ
SLGLTWLSNN IAVSGAQVTL TTSRGAIATR TKNTDSDGLV SFSISSDNAG FATVSATGTD
SGGNQVTART QIEFAATVAD NIIVDATPDS IGPTGEISTI SAVVRDARGN LVKGKTINFL
LDDVSGGQIS PNQATTDRSG IAKTVYTSNA LSTFEGVKVY GTVDDTQSVS AFTLLTVGDK
PFDIVFGTGN TIQSPTESSY TKEFSAFVTD PDSNPVENAN ITFSAPPKPF KQGGTYEKGF
WMFNTTTNIW NKNVTAVCDN EDVNGNGILD EGEDINGDEQ LTPGNVVAVQ SQGTTDENGQ
VVFTLSYPKA FGAWTTVSIT ANGESQGSES SEQHDYGLGV AADDLTDSAS APPANPYGES
ANCNDIL
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