Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2332 |
Symbol | |
ID | 4172486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2838513 |
End bp | 2839319 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055341 |
Product | hypothetical protein |
Protein accession | YP_661903 |
Protein GI | 109898648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAACA AGATTCAACA AGATGCGAAA CACATGGCTA TTGGCGCAGG TAAATTTAAA ATTCCGATGC CGCCCTCGTT TAGTGATAAA TTTGAACAAC GTGAATACGA AAAACAACAC TTAGCCGCGG GTTTTAGAGC GTTTGCGCTA CATCATTTTG ATGAAGGTTT AGCTGGCCAT ATTACCCTGC GCGACTGCAT AGAGCCTGAT ACGTTTTGGG TCAACCCTCT AGGTATTCAT TTTTCTATGA TTAAGGCGTC TGATTTAGTG CGTATTGATC ATCTAGGAAA TATTATTGAT GGTGCACATG CCGTCAATAA CGCTGCATTT GCAATACATT CTCGTCTCCA TATGGCCCGG CCTGATGTGA ATGCGGTTGC TCACGCGCAC ACTAAATATG GCAGAGCATT TTCTTCATTA GGCCAACCTC TGCTACCAAT TTCTCAAGAC GCGTGCATGT TCTTTGAAAA TCACGGTATT TTTGCCACGT TCACAGGTGT AGTGGCTGAA AAAGAGGAAG GCGATATGAT TGCTGAATCG CTGGGTGAAC ACAGTGCGGT TATTTTACAA AATCATGGTC TTATCACAGT GGGCTCATCG GTTGATGCAG CTGTGGCAAA CTTTATTTTG ATGGATAGCT GTTGTCAAAG CCAGTTACTG GCACAAGCTG CGGGGCCATT GACCTTAATA AATCCAGATA TTGCCCGTAA GACCAAAGCA GCCAACGGCT CTGAGCTCGT GACTTGGGGC AATTTCCAGC CTTTATATTC GATGTTGTTA GCGCAAGACG CCAGTTTCTT AGAGTAG
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Protein sequence | MSNKIQQDAK HMAIGAGKFK IPMPPSFSDK FEQREYEKQH LAAGFRAFAL HHFDEGLAGH ITLRDCIEPD TFWVNPLGIH FSMIKASDLV RIDHLGNIID GAHAVNNAAF AIHSRLHMAR PDVNAVAHAH TKYGRAFSSL GQPLLPISQD ACMFFENHGI FATFTGVVAE KEEGDMIAES LGEHSAVILQ NHGLITVGSS VDAAVANFIL MDSCCQSQLL AQAAGPLTLI NPDIARKTKA ANGSELVTWG NFQPLYSMLL AQDASFLE
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