Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2331 |
Symbol | |
ID | 4172485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2837508 |
End bp | 2838431 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055340 |
Product | LysR family transcriptional regulator |
Protein accession | YP_661902 |
Protein GI | 109898647 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGT TGCATAGTAA AATTGATTTA AATTTATTTC TTATTCTTGT CGCGGTTTAC CAAGAAGGCT CAATTACTGG AGCAGGTAAA CGACTCCATC TCAGTCAACC CGCGGTGAGT CATGCACTTT CAAGGCTCAG AGATAAATAT CAGGATCCGC TATTTGTGCG CCACGGACGC AAAATGATCG CCACTCAACT GTGCCAAACG ATTATGCCCA GGGTACTTAG CTCGGTGGCA GAGCTAGAGT CCACTTTGCA CGACATTGGC GACTTTGACG TCCATCAATA TCAGCGCGAA ATGAAGTTTG GTTTTAGGGA TATCCTCGAG TCTATATTCT TTCCTGAATT GGCCACTGAT CTGATGGCTA ACACTCCAAA TATTACAGTG CACAGCCGCC AAGTGAGCCG TCTAGACATG GAGGCTGCTC TTGAAAGCCA AGCTCTCGAC ATCGTAATCG ATGTGCTTAC ACCAACCAGT AATGATATTC ATCATACATT GATTTGTGAT GAACATTTTT CGTTAATTTG CCGCAAAGGC CACCCCATAT TATCTGATAT GAGCTTGGCT AATTACATTA AGGCCGAGCA TGCGTTAGTG ACCTTTAAAG ATTCTGCGGT CAATACCGTA GATATGGCAC TGGCTAAACA TGCTGTTGCG CGCAAGTTTG CTTTAAAATG TGAACATTAC TTTGCTGCAA CCAGTGTCAT CAGTCGCTGT GACATGTTGC TCACCATGCC CAACGCCTAT GCGCGATTAC TAAAACAACA AATGCCCGTT GAGGTCGTTC CTTTGCCGTT CGAGGTACCC ATTTTGCCTG TACACATGTA CTGGCATAAG CAAGCGGAGC ACGACCCACT GAATAGTTGG ATGCGGCAGA AGCTACTGGC TATTGCTAAA CGCGTTATTC CCCCGCCATC TTAG
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Protein sequence | MNMLHSKIDL NLFLILVAVY QEGSITGAGK RLHLSQPAVS HALSRLRDKY QDPLFVRHGR KMIATQLCQT IMPRVLSSVA ELESTLHDIG DFDVHQYQRE MKFGFRDILE SIFFPELATD LMANTPNITV HSRQVSRLDM EAALESQALD IVIDVLTPTS NDIHHTLICD EHFSLICRKG HPILSDMSLA NYIKAEHALV TFKDSAVNTV DMALAKHAVA RKFALKCEHY FAATSVISRC DMLLTMPNAY ARLLKQQMPV EVVPLPFEVP ILPVHMYWHK QAEHDPLNSW MRQKLLAIAK RVIPPPS
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