Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2302 |
Symbol | |
ID | 4172456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2802110 |
End bp | 2803462 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055311 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_661873 |
Protein GI | 109898618 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0020202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAT TTAGCACTTT GTTAGCATCT ACGTATCACA AGATAGGCTT CAAACGCTTG TTCTGGCGCG TTTTTATTTG GTTTTGGTTA TCCAGCTTGT TGGTGATGTT TGCCACCAGC TTTGTGATCA TCAGTAAATA CTCTTCAGAA GACTACACCA AACGCTACAG CAATGACGTG CTCACCCAAG CGGAGCGGAT CGTATGGCGC TATGAGCAGA CGTTGATTCC ACATGCAAAC CGGTCGATAA AATTAAAAAA TTGGATCAAT AAAAAAGAGA ACCGCCGGGG TCATCTGATG TCGATGCTGA TAATGGATGA CACTAACCAG CGTATTTATC ATTACCGCTT TAACAAAGTA AAACCTGAAG ACCGCCTCGA ATACTCGGTG TTAGGTCCCT CGGGGCGAAG CTACCTAGTT TTCAGTAAAA AACCGCAAGC GCCTAGGATA TACACGCAAC TAATGTATCG GTTCCAATCG CTGCAGTTCG TTTTCATTTT TTTTGCATCG GCATTGGTCA GTGCGTTACT CAGCTGGAGT ATAACGCGAC CATTAAATTA TCTCGGTTCG TTTAGTCGTC ACTATGCCAA CAAGCAAGAA GTTGCCCCAC TGCCGCGTGC ATTGCTTACC CGAGGCGATG AGGTGGCTGA TTTAGCCCAA GACATCGAAT TTATGATCAA TAAAACTCAT GCCGCAGCCA CTGCTCAGCA ACAATTACTG CATGATGTAT CCCATGAATT GCGTGCCCCA CTGGCCCGTT TGCAAGTATC GGCTGCACTT ATCGAACAGA AAAGCCCAGA CAGTCGTCAC GTTAAACAAA TACACAATGA TTGTTTGCGC ATTGATCAAC TTATTCAGCA GATCCTCGAT TACTCTAAAC TTGAACAGGG TAACCCAGCT CAGGAGCCTT GTAGTATTAA CGCGTTGTGC GAGCAAGTGA TTAAAAACAT GGCCGTTACC TATCCTAATA TTCCAGTCAC ATTCAAAGCG GATAACAAGG CACAGTTAAA TGGCTACCCA GAAGCATTAT TGCAAGCATT CGACAACATC ATTGGTAATG CCTGTAAATA TTCATCTGAC GGGCAATCAG TAGACATTAG CGTACACAAC AGAGAAAACA GTATCGTCGT CAGCGTACGG GATCATGGCC CTGGCGTGGA TGAAAGTGAA ATGGCTAAAT TACTGCAACC CTTTTATCGC GCTGGCAATA AAATGCACAC CAATGGGTTT GGTTTAGGGC TGAGTATCGC ACTTAAGGCC ATCAACAAAC ATCAAGGCGA ACTTCGTATG TCAACACCCG ACGGTGGCGG ATTGCTTGTT GAAATAATAC TGCCTCAAGA TACACTCGCT TAG
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Protein sequence | MAKFSTLLAS TYHKIGFKRL FWRVFIWFWL SSLLVMFATS FVIISKYSSE DYTKRYSNDV LTQAERIVWR YEQTLIPHAN RSIKLKNWIN KKENRRGHLM SMLIMDDTNQ RIYHYRFNKV KPEDRLEYSV LGPSGRSYLV FSKKPQAPRI YTQLMYRFQS LQFVFIFFAS ALVSALLSWS ITRPLNYLGS FSRHYANKQE VAPLPRALLT RGDEVADLAQ DIEFMINKTH AAATAQQQLL HDVSHELRAP LARLQVSAAL IEQKSPDSRH VKQIHNDCLR IDQLIQQILD YSKLEQGNPA QEPCSINALC EQVIKNMAVT YPNIPVTFKA DNKAQLNGYP EALLQAFDNI IGNACKYSSD GQSVDISVHN RENSIVVSVR DHGPGVDESE MAKLLQPFYR AGNKMHTNGF GLGLSIALKA INKHQGELRM STPDGGGLLV EIILPQDTLA
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