Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2278 |
Symbol | |
ID | 4172432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2771248 |
End bp | 2771673 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638055287 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_661849 |
Protein GI | 109898594 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0502314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGCC TGCTACTGCC GCAACGCCGA AAACAAAGTA TCAGTCTGAC TGCATTAATT GATGTGGTAT TTATTCTTCT GATGTTCTTT ATGCTGACCT CGTCCTTCAC CAAGTTCAGT ACTGTGGAAA TGCAATCGAG TTTGGCGGCC AGTGTGTTGT CTGACAGCAA ACCACAACTC TTACGTTTAA GCCCGGACGG GCAGTTATCC GATGCACAAC TGTCGGTTGG GAACAGCGCA ACGCTGACAG ATTCAGCCCT GTCAAATGTG TTTGAAACGC ATTTGCCAAC GGTGTTACAG CCAGCAGCTG ATACGCAAGT ACAAGTCATT GTTGATGCGC TTTCACGCAT GAAGGTATTG GGTTTTACGC AAGTTACTTT GGGTAAGTCT CGTCCTCAGG CTAACGCGAT AGCGGGGCAA CAATGA
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Protein sequence | MSSLLLPQRR KQSISLTALI DVVFILLMFF MLTSSFTKFS TVEMQSSLAA SVLSDSKPQL LRLSPDGQLS DAQLSVGNSA TLTDSALSNV FETHLPTVLQ PAADTQVQVI VDALSRMKVL GFTQVTLGKS RPQANAIAGQ Q
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