Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2219 |
Symbol | |
ID | 4172371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2682815 |
End bp | 2683504 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638055227 |
Product | cytochrome B561 |
Protein accession | YP_661791 |
Protein GI | 109898536 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.916384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACATC ACAAAACATT GGTCTGGGAT CTCCCCTTAC GCATTTTTCA TTGGGCCCTC GTACTGCTGA TTTTTGCGCA GTGGCTAACG GCTGAAGTAT TAGATGGCTA CATGGATCTG CATGCTAAAT TTGGTTACGG TTTATTAGGC TTGGTAATAT TTCGAATAAT TTGGGGATTT GCTGGGCCAA AACATGCCCG GTTTAGTTCT TTTTTACGTG GCCCTAGCGC CATTTTACAC TACACAAGTA CACTTTTTAG CCGCCATCCA TCAACGTACA CGGGGCATAA TCCACTCGGC GCCCTAATGG TGCCCGCTAT TTTGATTGTG GTCGGCGCTC AGGCATTAAG CGGTCTGTTC GTTACCGATG ATGTGTTATT TACAGGGCCT TATTACTCAA GCGTATCTGA TGAGACGCAG GGTATCATGC AGTGGCTGCA TCACACCCTG TTCGATGTAT TATTGGTGAT TATTGGTTTA CACATTAGTG CTATTTTAAG TTACGAGTTA TTGCTTAAGA AGCCCTTGAT CGGTGCGATG CTTCATGGGC ATAAAAATGT GCAATCGAAA AGCGGGATTA ATCATTCAAG ACTGATATTA GCTTTAGTAC TGGCGATGGT TATTTGTGCC TTCATATATT GGTTGGTCGT TATTGCTCCG CCCGAAGTAG AACTTGATTA TTACTATTGA
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Protein sequence | MTHHKTLVWD LPLRIFHWAL VLLIFAQWLT AEVLDGYMDL HAKFGYGLLG LVIFRIIWGF AGPKHARFSS FLRGPSAILH YTSTLFSRHP STYTGHNPLG ALMVPAILIV VGAQALSGLF VTDDVLFTGP YYSSVSDETQ GIMQWLHHTL FDVLLVIIGL HISAILSYEL LLKKPLIGAM LHGHKNVQSK SGINHSRLIL ALVLAMVICA FIYWLVVIAP PEVELDYYY
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