Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2199 |
Symbol | |
ID | 4172351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2658460 |
End bp | 2658984 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638055207 |
Product | negative regulator of replication initiation |
Protein accession | YP_661771 |
Protein GI | 109898516 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.721906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA TTGAAATAGA AGATGATTTG TACGCATATA TAGCGTCTCA GACACAACAC ATTGGTGAGA CGGCCTCAGA TATTCTGCGT CGGTTGGTTA TGCCAGAAAA CACAGTAGTG AAAACGGTTG TGGCTGCTAA ACCAAGCGCA ACAACGAAAA AACCAGTAGG TGATGTTTTT AGTCAGATAA CCACTGACGA ATTAAGTGAA TATCCGAAAA TGGTTGAGCG ATTCTTAAAG ATTTTATCGG TACTTGAGAG CATGCATGGT GCTCAGTTCG ATGAAGTACT CACACTCAGT GGCAGAAATC GCGTGTACTT TGCTAAAGAC AAAGAGACGT TGTTGCAAGC CAGTAGTGTG ACAAACCCAA AGCAGATCGG AGAATCTACG TTTTGGGTTA TGACCAACAA TAACACGGCT AAGAAAGCGT CATTAATTAA GGAAGTAGCA GAAGTACTAG GCTACAACGC GAACGATGGA CAACGTCTTG CCGCATTATT TGCCCCGGAA TTATATGAAG ACTAA
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Protein sequence | MKNIEIEDDL YAYIASQTQH IGETASDILR RLVMPENTVV KTVVAAKPSA TTKKPVGDVF SQITTDELSE YPKMVERFLK ILSVLESMHG AQFDEVLTLS GRNRVYFAKD KETLLQASSV TNPKQIGEST FWVMTNNNTA KKASLIKEVA EVLGYNANDG QRLAALFAPE LYED
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