| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2178 |
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| Symbol | |
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| ID | 4172330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2628540 |
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| End bp | 2629301 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055186 |
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| Product | hypothetical protein |
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| Protein accession | YP_661750 |
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| Protein GI | 109898495 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.335063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA CTAATGTGGC GTTACTTAGC TACTTAAATG AACTTTTAAA GCCCGAAAGA
GTGCAAGATT TTTGTCCAAA CGGTTTACAA GTCGAAGGCA AAACGCAGAT TCAAAAAGTC
GTGTGTGGTG TGACTGCTTC ACAAGCACTC ATTGATAAAG CAATACAATT AAATGCCGAT
GCGATTTTTG TACATCATGG TTTCTTTTGG AAAGGTGAAG CGGCAAATAT CTGTGGGATG
AAGAAAAAGC GCATAGCTGC GTTAATTAAG AACGATATCA ACCTATATGC CTACCACTTA
CCTCTCGATA TACACGACGT ATTGGGCAAC AACGCTCAAC TAGGAAAACT GCTGAATATG
GCACAAATCA GTCCGTTACT GTCTGAGTCT CCAGAGGGGA TCGTTATGCA GGGACGGCTC
GAACCCGCTA TGTCGGCGCG AGCCCTATCC GACAAGTTGG TCAGTATATT AGGGCGTGTA
CCGCTACATG AAGGTGCTGA CTCTGACCTG ATTAAGAGTG TTGCCTGGTG CACGGGCGGT
GGGCAAGGGT ACATTGAAGC GGCAGCACGT GCGGGCTTTG ATGCATTTAT TACCGGAGAA
GTCTCTGAGC AAACTATCCA TAGCGCCAGA GAAATGAATA TTCATTTTTA TGCCGCTGGG
CACCATGCCA CAGAGCGCTA TGGCGCAAAG GCGATAGCTG AGTATCTCGA CGCCAAAACA
CTACTGAACG CAGAGTTTAT TGATATACCC AATCCCGCTT AG
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| Protein sequence | MSMTNVALLS YLNELLKPER VQDFCPNGLQ VEGKTQIQKV VCGVTASQAL IDKAIQLNAD
AIFVHHGFFW KGEAANICGM KKKRIAALIK NDINLYAYHL PLDIHDVLGN NAQLGKLLNM
AQISPLLSES PEGIVMQGRL EPAMSARALS DKLVSILGRV PLHEGADSDL IKSVAWCTGG
GQGYIEAAAR AGFDAFITGE VSEQTIHSAR EMNIHFYAAG HHATERYGAK AIAEYLDAKT
LLNAEFIDIP NPA
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