Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2135 |
Symbol | |
ID | 4173390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2583926 |
End bp | 2585233 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638055143 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_661707 |
Protein GI | 109898452 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTG CCGATTTAGG CTTATCCCCC GCAATTTTGT CTGCCGTTAC AGCGAAAGGC TACACAGACC CATCTCCAAT TCAAGCACAA GCCATACCTG CCATATTAGA AGGCAAGGAC ATCATGGCAG CAGCACAAAC CGGTACAGGT AAAACAGCGG GCTTTACTCT GCCTTTACTC GAATTGCTGA ATCGTGGAAC ACATGCACGT GGAAACCAAG CTCGTGCATT AGTGTTAACT CCTACGCGTG AACTTGCAGC GCAAGTCGCT GCCAGTGTGG TTGACTATGG CAAGGATCTT CCATTGCGCT CAGCTGTTGT GTTTGGTGGT GTTGGCATCA ACCCACAGAT GATCAAGTTG CGCAAAGGCG TCGATATTCT AGTCGCCACA CCGGGGCGCT TGCTTGACCT GTATAACCAG AATGCGGTTA GATTTGACGA TTTAGAAATT TTGGTGCTGG ATGAAGCGGA CCGTATGCTA GATATGGGCT TTATTCACGA CATCAAAAAG GTGCTAAAGC TGCTACCAAC GAAACGTCAA AACTTACTTT TTTCAGCCAC CTTTTCAGAT GATATACGTG CATTAGCGAA AGGGCTTGTG AATAACCCGG TCGAAGTATC TGTTTCCCCG CCTAATACAA CAGTAGAAGC CGTGGAACAG TTTGTGTGCC CCGTTGATAA GAATCAAAAG ACACCCGCTT TGATTCGCAT GATTAAAGAC AATGATTGGC AACAAGTGTT GGTATTTAGC CGCACTAAAC ATGGTGCGAA TCGGATCGCC AAGCAGCTTG AAGCGCGTGG TATTACCTCA GCGGCTATTC ACGGTAACAA AAGTCAAGGC GCTCGTACAA AAGCGCTAGC CGAGTTTAAA AGCGGTAAAG TGCGTGCATT AGTGGCGACC GATATTGCTG CTCGTGGTCT AGATATCAGT CAATTACCCC AGGTAGTCAA CTATGACCTA CCCAATGTAG CAGAAGATTA CGTTCACCGT ATCGGTCGAA CAGGCCGTGC TGGTGCAAGT GGACAAGCTA TCTCACTTGT CACCGCGGAT GAGTTTTCCT TGCTGGCTGA TATTGAACGT TTTACTAAGC AAATCATTCC ACGCAAGGGG ATTGAAGGGT TTGAGCCTGT TCATGCATTA CCTGAATCAA GATTAGATTC GCGCCCTATT AAACCTAAAA AGCCTAAAAA ACCTCGAGTT CAGCACCGAG ATGGTCAACG TTCTGGTGAT AATGCTCGTG GGCACCACTC TGGTAACCGT CGGGGTAATG GGCCTAAAAA TGCCAGCCCT CGCCGCTCAG CGTCTTAA
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Protein sequence | MSFADLGLSP AILSAVTAKG YTDPSPIQAQ AIPAILEGKD IMAAAQTGTG KTAGFTLPLL ELLNRGTHAR GNQARALVLT PTRELAAQVA ASVVDYGKDL PLRSAVVFGG VGINPQMIKL RKGVDILVAT PGRLLDLYNQ NAVRFDDLEI LVLDEADRML DMGFIHDIKK VLKLLPTKRQ NLLFSATFSD DIRALAKGLV NNPVEVSVSP PNTTVEAVEQ FVCPVDKNQK TPALIRMIKD NDWQQVLVFS RTKHGANRIA KQLEARGITS AAIHGNKSQG ARTKALAEFK SGKVRALVAT DIAARGLDIS QLPQVVNYDL PNVAEDYVHR IGRTGRAGAS GQAISLVTAD EFSLLADIER FTKQIIPRKG IEGFEPVHAL PESRLDSRPI KPKKPKKPRV QHRDGQRSGD NARGHHSGNR RGNGPKNASP RRSAS
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