| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2122 |
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| Symbol | |
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| ID | 4173377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2570306 |
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| End bp | 2571043 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055130 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_661694 |
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| Protein GI | 109898439 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000118784 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGGAT TAGACGGAAA AATAGCACTT GTAACGGGCG CTAGTCGCGG TATCGGTAAA
GCGATCGCTG AACAATTAGT CAACGATGGA GCGACGGTCA TTGGTACAGC TACATCTGAA
GCTGGCGCCA ACGCTATCAG TGAGTATTTG GCGGACAATG GCAAAGGCAT GGTACTCAAC
GTATCAGAGC CAGAATCGAT GACTCGCTTG TTAGCTGACA TCGCAGAACA ATTTGGTGTG
ATCGATATTT TGGTCAATAA TGCCGGTATC ACCCGGGATA ACCTGCTCAT GCGAATGAAA
GATGAAGAAT GGCAAGATAT CATTAATACC AACCTCACAT CCGTGTTTAA CATGTCTAAA
GCAGTTTTAC GTGGCATGAT GAAAAAACGT TGTGGTAGAA TCATCAATAT TGGTTCTGTT
GTTGGCAGTT CAGGTAATGC AGGTCAAGCA AACTATGCTG CAGCGAAAGC TGGCGTTATA
GGTTTTACTA AATCAATGGC ACGTGAAGTC GCTTCTCGTG GAATTACAGT CAATGTAGTT
GCTCCAGGTT TCATTGATAC TGATATGACC AAGGCACTGA ACGACGACCA ACGTGAGGCC
ATTTTTAAAG ATATTCCAGC AAATCGTTTA GGCTCTGTTC AAGAAGTTGC CTCAGCGGTT
GGCTTTTTAG CTAGTAATAG CGCCGCATAC ATAACAGGGG AAACCTTGCA TGTAAACGGT
GGAATGTATA TGGGGTAG
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| Protein sequence | MSGLDGKIAL VTGASRGIGK AIAEQLVNDG ATVIGTATSE AGANAISEYL ADNGKGMVLN
VSEPESMTRL LADIAEQFGV IDILVNNAGI TRDNLLMRMK DEEWQDIINT NLTSVFNMSK
AVLRGMMKKR CGRIINIGSV VGSSGNAGQA NYAAAKAGVI GFTKSMAREV ASRGITVNVV
APGFIDTDMT KALNDDQREA IFKDIPANRL GSVQEVASAV GFLASNSAAY ITGETLHVNG
GMYMG
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