| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2118 |
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| Symbol | |
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| ID | 4173373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2566595 |
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| End bp | 2567533 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055126 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_661690 |
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| Protein GI | 109898435 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0134865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCT TGCATTATCT AAAGCAACAA GCAGAAAGAC CATTAACGCT TAATGAGCCA
CTTTTACTTA CTGTCAAGAA AGGGCAGTTC TCTAACAGCA TTTTAAAGCA GCTGAAAGAA
CAATCACTGA TTGATGACAC CCTCGGTCTT AAAGTGATGC TCAAAGTAAT GCCGGAGATC
GCTAATGTAA AAGCAGGCAC TTACGAAATC GAGCCAGGCA TGAACGGTAT CGATGTTTTC
CAACTTATTG CCAGTGGTAA GGAGAAGCAA TTCGCCCTTA CATTGGTAGA AGGCCTTAGG
TGGCAAGATT GGGAAAAGCA GCTTACGAGT CATCCCTACG TTAAGGTGGG TGATGACTTT
AGCGAAAATG TAAAAAGATT TAGCCACGAC ATTGAAGGCC AATCTTTAGA GGGATGGCTG
ATGCCGGACA CCTATCATTT TGTGGCAGGC ACCAGTGCAT TTACCATCGT AAAATGGGCA
TACAGCGCAA TGCAAAAGGA ACTCGCACTG CAATGGCAAC ATCGCGACCA GAATGTGCCT
TATGCAACGC CTTACGAAGC GCTTATTATG GCGTCCATTA TTGAAAAAGA AACCGCATTA
GGCGAAGAGC GAAGTCGTAT AGCAGGCGTA TTTGTTAATC GCCTGCGGTT AAATATGCGT
TTACAAACCG ATCCGACTGT TATTTATGGC ATTGAAGATT TCGACGGTAA TATCACGCGT
AAAGACTTAA GACAAGCAAC GCCTTATAAT ACCTACGTGA TTAAAGGTTT AACACCAACC
CCCATCGCCA TGCCCAGTAA GCTAGCGATA AATGCAGCCC TCAACCCGTT AGCCACTGAC
GAGCTGTATT TTGTGTCTAA AGGGGATGGC AGTCATCACT TTTCAGAAAC GTTACAAGAA
CATAATCGTG CCGTACGGCA GTACCAATTA AATCGTTAA
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| Protein sequence | MTGLHYLKQQ AERPLTLNEP LLLTVKKGQF SNSILKQLKE QSLIDDTLGL KVMLKVMPEI
ANVKAGTYEI EPGMNGIDVF QLIASGKEKQ FALTLVEGLR WQDWEKQLTS HPYVKVGDDF
SENVKRFSHD IEGQSLEGWL MPDTYHFVAG TSAFTIVKWA YSAMQKELAL QWQHRDQNVP
YATPYEALIM ASIIEKETAL GEERSRIAGV FVNRLRLNMR LQTDPTVIYG IEDFDGNITR
KDLRQATPYN TYVIKGLTPT PIAMPSKLAI NAALNPLATD ELYFVSKGDG SHHFSETLQE
HNRAVRQYQL NR
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