Gene Patl_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2107 
Symbol 
ID4173786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2552107 
End bp2552586 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID638055115 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_661679 
Protein GI109898424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.916384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTA ATTTGATTCT ACAGGCCTTT TTAGGCGGCG GTTTAATTGG CTTAGGTGCT 
TTTGCGCTGA TGCTGTTTAA TGGCAGAATT GCCGGTATTT CCGGTATCAC CTTCGGCGCT
ATTTTTAGTC ACAATGGTGG TGGTAAAAAT AACAATAGCG AGAACAACAA ATGGCGTTGG
TTCTTCATTC TTGGGTTAGT GATTGCGCCA TTGATCACCA GTGTGTTTGG CTTTTCATTG
CCTGATACCT TTCCCAGTGC TTTTAGTGCG AGTAGCAACA ATGTCATCAA TATATCATTG
ATGGTAATTG GCGGTTTGTT AGTGGGTTTT GGTACTAACC TGGGTTCAGG CTGCACCAGT
GGCCATGGTA TATGCGGTAT TAGTCGATTA TCTGCTCGCT CAATTACCGC AACCTGTGTG
TTTATGGTTT CCGCCATTCT CACGGTTGCA ATGATTAAAC ACCTGTTTGG AGGTGCATAA
 
Protein sequence
MNTNLILQAF LGGGLIGLGA FALMLFNGRI AGISGITFGA IFSHNGGGKN NNSENNKWRW 
FFILGLVIAP LITSVFGFSL PDTFPSAFSA SSNNVINISL MVIGGLLVGF GTNLGSGCTS
GHGICGISRL SARSITATCV FMVSAILTVA MIKHLFGGA