| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2097 |
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| Symbol | |
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| ID | 4173776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2541393 |
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| End bp | 2542589 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055105 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_661669 |
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| Protein GI | 109898414 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.827775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAGCA TAAATAAGCG ACCTACCCCT GATCAGGATG AAGCGGATGC CCTCGCCAAA
TTAAACGCAT TACTTAACGC GGCTGTCGAT GCAATGATCA TTATCGACCA TACCGGCACG
ATTGAATTAT TTAATGCAGC GGCCCAAAGA ATGTTTGGCT ATTCAGTGCA AGAGGTAATT
GGCCAAAATA TTAAGATGCT GATGCCTGAA CCCTATCGTA AAGAGCATGA TCAATATTTA
GACAACTATA TGAGAACCAA TCAAGCTCGG ATTATTGGTA TTGGGCGTGA GGTAAAGGCG
TGCAAGAAAG ACGGTGAGAT ATTTCCTATC GAGCTTTCTG TTGGCGAAGT AAAAGAGTCA
AGCCATAAAC AGTTTGTTGG TATTATTCGT GATATTTCCG ATCAAGTGCA AGCGCGCTCA
GATGCTATTG CTAATCGAGA AAGATTAGCT CACGTAACCC GGCTTAGTAC TATGGGAGAA
ATGGCTGCAG GGATTGCCCA TGAAATCAAT CAACCCTTAT CTGCCGTAAG TAGTTATGCC
CAAGCGTGCA AGAATTTATT GCAACGCGAA AACAGCTTAG CCAATGCATC TCAAAAACAA
AAATTAACTG ATACGCTAGA AAAAATCAGT AACCAAGCCC TAAGAGCCGT TGAAGTTATT
CGGCGCCTAC GAGAATTTGT CAAAAAGCGC AATACAGAAA GAGAGTACAT TAACTTTAAT
GACCTTATTC AAGACACTAT TGATTTGGCG AAAGTTGATA CTCGCCTACT CGATCATGGT
ATAAAACTAA CGTTATGTAA CGCTCCCGCC CCGTGCTTGC TCGTAGACCA AGTACAGTTA
CAACAAGTCC TCTTTAACCT TATTCGTAAC GCGATTGACG CCATGGAAGA TCAACCCTCG
GCGCCTGTAA TGATCCACAC AAAATGGATA AACGAACAAT ATCTGGAAGT GTCTATTTGC
GATACTGGCT ATGGCATAAC AGAAGAAAAT AGGGCGCGAC TCTTTCACCC TTTTTTCACT
ACTAAAACGT CTGGTATGGG CATGGGGCTG CCTATTTGTC AGTCCATCAT ACAGTCGCAC
GGAGGTGAAC TAAAGCATAG CCCTGGTAGC CCTCAAGGAA GTGTTTTTTC GTTTACCCTG
CCCGCTAAAC CTATCGTTAA TCACAAAACC GATGAAGTAA CTAACAATGA AGAATAA
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| Protein sequence | MDSINKRPTP DQDEADALAK LNALLNAAVD AMIIIDHTGT IELFNAAAQR MFGYSVQEVI
GQNIKMLMPE PYRKEHDQYL DNYMRTNQAR IIGIGREVKA CKKDGEIFPI ELSVGEVKES
SHKQFVGIIR DISDQVQARS DAIANRERLA HVTRLSTMGE MAAGIAHEIN QPLSAVSSYA
QACKNLLQRE NSLANASQKQ KLTDTLEKIS NQALRAVEVI RRLREFVKKR NTEREYINFN
DLIQDTIDLA KVDTRLLDHG IKLTLCNAPA PCLLVDQVQL QQVLFNLIRN AIDAMEDQPS
APVMIHTKWI NEQYLEVSIC DTGYGITEEN RARLFHPFFT TKTSGMGMGL PICQSIIQSH
GGELKHSPGS PQGSVFSFTL PAKPIVNHKT DEVTNNEE
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