| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2024 |
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| Symbol | |
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| ID | 4173898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2467200 |
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| End bp | 2467589 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638055032 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_661596 |
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| Protein GI | 109898341 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG GTGAACTATC AAAAAAGAGT GGGTGTACTA TCCAGACGAT CCGCTTTTAT
GAAAAACAGG ATTTGTTGGA AGCTTGCAAT CGCAGTGACG GCAACTACAG AATTTACGAC
GCCTCATCGT TAAGGACATT GCAATTCATT AAACAGTGCC GTTCCTTAGG ATTGACTATA
ATTGAAATTA AGCAGTTATT GGATACAAAA AATAATCCCG ATAAAAGTTG TTCTAGTGTG
AACAATTTGA TCCACCAACA TATGATTGAC GTCACTCATC GCATTGCAGA GCTTGAGGAG
CTAAAACTTA CACTATCTGA GATGGCTTCG GCATGCACCG ATAATAGAAA AGTTAAAGAA
TGTGGGGTAT TGCAGTTACT TGAAGAGTGA
|
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| Protein sequence | MKIGELSKKS GCTIQTIRFY EKQDLLEACN RSDGNYRIYD ASSLRTLQFI KQCRSLGLTI
IEIKQLLDTK NNPDKSCSSV NNLIHQHMID VTHRIAELEE LKLTLSEMAS ACTDNRKVKE
CGVLQLLEE
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