| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2000 |
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| Symbol | |
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| ID | 4173874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2433883 |
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| End bp | 2434881 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055008 |
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| Product | BNR repeat-containing protein |
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| Protein accession | YP_661572 |
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| Protein GI | 109898317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.177626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAT CCCTTGCAAG TGCAGTGATT GCCGTTTTAC TTGCGCCTTT AGCGTCTATC
CAAGCCGCTC AGAGTAGTTT TCAAGCCCCT CTCGTTGACC AGTCTTTATT ACTTGATATC
GCCCACAGCG GTGACCAACT TATTGCCGTA GGTGAACGCG GACACATTAT TCGTTCAAAT
GATGGTCAGG CATGGCAACA GATGGATGTA CCGTCAACAT CGACTTTGAC TGGCGTTTAT
TTTGTTGGCC AACAAGGCTG GGCAGTCGGT CATGACTTCA TCATTTTACA CACTCAAAAC
AATGGCCTCG ATTGGGAAAT ACAACATTTC GCTCCAGAAC AAGAACGCCC ATTGTTGGAC
GTTGTCTTTT TCAATGAAAA TGAGGGCATT GCGATTGGCG CCTATGGCGC GTTTTTGCGC
ACTGAAGATG GCGGTAAATC ATGGCGTAAT GAATTACACG CCGAATTTGT GAATCAAGCT
GACCAAGAGT ATCTAAATGA ATTACGCCTT GAAGATGAAG CGTTTTACCA GGAAGAACTC
GCCGCTATTT TACCTCACTT AAACAGTGTT TCTGTTTCTG GCAATGAAGT TTATTTAGCT
GGTGAAGCAG GCCTGCTAGC GATGAGTTCA GACAAAGGCC AAACGTGGAA AAGAATGGAT
ATTGACTATC ATGGCTCCTT TTTTAACATC GCCAAAACCG AGTCTGGCGA TCTGATTGCC
ACAGGTCTAC GCGGAAATGT ATTTAGTTAC AACAGTGAAT TGCAAAAGTG GCAAGCTGTT
GACTCAGGTA GCAAGGCATC CATGAATGGT ATTGTTTCTG TGGACGAGTC TCGTACGGTA
TTGCTTGGCA ATAATGGCGC CGTGGTGACT ATGCAGGGCG ACGATGTTGA CTATAAGCAA
CAAAGCGATG GCCAAGCGCT TATCAATGGT GTGTTGTTCA ACAATCAAAT TATCGCAGTG
TCGATCGACG GCATTAAACA TTTGCAGCAA GCACGGTAG
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| Protein sequence | MKLSLASAVI AVLLAPLASI QAAQSSFQAP LVDQSLLLDI AHSGDQLIAV GERGHIIRSN
DGQAWQQMDV PSTSTLTGVY FVGQQGWAVG HDFIILHTQN NGLDWEIQHF APEQERPLLD
VVFFNENEGI AIGAYGAFLR TEDGGKSWRN ELHAEFVNQA DQEYLNELRL EDEAFYQEEL
AAILPHLNSV SVSGNEVYLA GEAGLLAMSS DKGQTWKRMD IDYHGSFFNI AKTESGDLIA
TGLRGNVFSY NSELQKWQAV DSGSKASMNG IVSVDESRTV LLGNNGAVVT MQGDDVDYKQ
QSDGQALING VLFNNQIIAV SIDGIKHLQQ AR
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