| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1975 |
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| Symbol | |
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| ID | 4172110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2398166 |
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| End bp | 2400427 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054983 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_661547 |
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| Protein GI | 109898292 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACCTA GAGTAAACAA ACGTTCAAAC TGCATTGCTA AAAAAACCTC AAATCGCCTT
ATTAGTGCCG TATCTTTGGC AATAGCCTCA TTGTGCATCA GCCAGAGTGC CTTAGCCGAT
GGTATGCCTA AGACCAATAC ATTTTGGTGG CCAGAGCAAC TGAACTTGCA GCCGCTTAGG
CAGAATGATG CGAAATCGAA CCCCTTGGGA GGAGACTTTA ATTATGCAGA CGCATTTAAA
ACGTTAAATT TAGCGAATGT GAAAAGCGAT ATTAAAGCAC TGTTAACCTC ATCCCAAGAT
TGGTGGCCAG CAGACTATGG CCATTACGGA CCGTTCTTTG TGCGAATGGC GTGGCACAGT
ACTGGTACCT ATCGCATGTC AGATGGACGC GGGGGCGGGG CAGGTGGCCA GCAGCGGTTC
GAGCCGCTCA ACAGCTGGCC GGACAATGTG AGTCTTGATA AAGCAAGGCG TTTGCTGTGG
CCAATTAAGC AAAAATACGG TCGCAGTTTG TCCTGGGCTG ATTTGATGGT GCTTACCGGA
AATGTAGCGA TGGAGTCTAT GGGCTTTACT ATTTATGGAT TCGCCGGCGG TAGAGAAGAC
GACTTCGAAC CAGATTTGGT TTACTGGGGG CCGGAAAAAA AATGGTTAGG GGGGAATGAG
CGTTATTCTG GTGAGCGAAA ATTAGAGGAG CCTCTGGCAG CGGTGCAAAT GGGTCTAATT
TACGTTAATC CTGAGGGGCC AAATGGTAAT CACGACCCTA TTTCAGCGGC TGCCGATATT
CGTGATGTGT TTGCACGTAT GGCCATGAAT GACGAAGAAA CGGTGGCACT CATCGCTGGG
GGCCACACGT TTGGGAAAGC TCACGGTGCG CACAAACCAG ATGAATGCTT AGATCCTGCT
CCAGCCGGAG CAACGATTGA AGAGCAAGGT TTAGGCTGGA AAAACAAGTG CGGAAAAGGC
AATGCAGAAG ACACCATTAC TAGCGGCTTG GAAGGGGCTT GGTCTGTCAG CCCAACTCAA
TGGACCATGC AATATTTAGA TAATTTATTT GGATTTGAAT GGGTTGAAAC CCAAAGCCCC
GCGGGAGCGA CTCAGTGGAT CCCTAAAGAT AATGCGGGTG CGAATTTGGT GCCTGATGCA
CATGTCAAAT CCAAGCGCCA TGCGCCCATT ATGTTTACGA CTGATTTAGC GCTGAAAGAG
GATCCTCAGT ACAGAAAAAT CGCTGAACGC TTTCATGCCA ATCCGAAGGA GTTTGAGTTA
GCGTTTTCAA AAGCATGGTT TAAATTAACC CATCGAGATA TGGGCCCTCG CGCGCGTTAC
GTAGGTGATG AGTCGCCAAC GGACGACTTC TTATGGCAAG ACCCTATTCC TAGCGTGGAC
TATTCGCTAA TTGATAAACG TGACATCCAA CACCTAAAGA CGAAATTACT TGATGGTGAT
GTTACGCCTG CTCAATTAGT CAAAACAGCA TGGGCGGCTG CAGCCAGTTT CAGAGCGACA
GATATGCGCG GTGGTGTGAA CGGCGCTCGT ATTCAACTCG CGCCACAAAA AAACTGGGAA
GTGAACAATC CGGACGAATT GAACACGGTT TTAATGTTCC TTAACAAGGT GAAAAAAGAC
TTCAATGACG GGCAAAGTGG TAATAAACAA GTATCGTTAG CGGATTTAAT TGTGCTTGGC
GGCGCAGCGG CCATTGAACA CGCCGCGAGT AAAAATGACT TCGACGTTGA AGTGCCCTTT
ATACCGGGGC GCAGCGATGC AACCCAGGCT CAAACAGAAG TGGAATCTTT CGCGGTACTA
GAGCCAAAAG CGGATGGGTT TAGAAACTAC TACGCTCAGG GAAATACCTT ATCACCGGTT
GAGATGTTAG TGGACAAAGC GAATACTCTA GATTTATCCG TTCCCGAAAT GAGTGTGTTA
GTGGCAGGTT TGAGAGTGAT GAATATCAAT GCCGATGGTA GTGATAGGGG CGTACTGACA
GATAATCCCG GAACCTTAAA CAACGACTTT TTTGTTAATT TACTCGATAT GTCAACGCGC
TGGGAAAAGG CGAAAGACCA ACAGGATCTC TATCTCGGAA TAGATCGTAA AAGCAACAAA
CAACGTTGGT CCGCCTCCTC AGTGGACTTG ATATTTGGCT CTAATTCAGA GCTAAGAGCG
GTCGCAGAGG TGTATGCGTC TGATGATGCT CACCAACAAT TTGTGGATGA TTTTGTTAAC
GCGTGGACTA AAGTCATGAC CTTAGATCGC TTTGATTTGT AG
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| Protein sequence | MLPRVNKRSN CIAKKTSNRL ISAVSLAIAS LCISQSALAD GMPKTNTFWW PEQLNLQPLR
QNDAKSNPLG GDFNYADAFK TLNLANVKSD IKALLTSSQD WWPADYGHYG PFFVRMAWHS
TGTYRMSDGR GGGAGGQQRF EPLNSWPDNV SLDKARRLLW PIKQKYGRSL SWADLMVLTG
NVAMESMGFT IYGFAGGRED DFEPDLVYWG PEKKWLGGNE RYSGERKLEE PLAAVQMGLI
YVNPEGPNGN HDPISAAADI RDVFARMAMN DEETVALIAG GHTFGKAHGA HKPDECLDPA
PAGATIEEQG LGWKNKCGKG NAEDTITSGL EGAWSVSPTQ WTMQYLDNLF GFEWVETQSP
AGATQWIPKD NAGANLVPDA HVKSKRHAPI MFTTDLALKE DPQYRKIAER FHANPKEFEL
AFSKAWFKLT HRDMGPRARY VGDESPTDDF LWQDPIPSVD YSLIDKRDIQ HLKTKLLDGD
VTPAQLVKTA WAAAASFRAT DMRGGVNGAR IQLAPQKNWE VNNPDELNTV LMFLNKVKKD
FNDGQSGNKQ VSLADLIVLG GAAAIEHAAS KNDFDVEVPF IPGRSDATQA QTEVESFAVL
EPKADGFRNY YAQGNTLSPV EMLVDKANTL DLSVPEMSVL VAGLRVMNIN ADGSDRGVLT
DNPGTLNNDF FVNLLDMSTR WEKAKDQQDL YLGIDRKSNK QRWSASSVDL IFGSNSELRA
VAEVYASDDA HQQFVDDFVN AWTKVMTLDR FDL
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