Gene Patl_1963 details

Gene Information

• Locus tag: Patl_1963
• ID: 4172098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 2379175
• End bp: 2379912
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 638054971
• Product: SapC
• Protein accession: YP_661535
• Protein GI: 109898280

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.78249
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAAC TACAACTCCT TACCTCTGAA GCACACGGCA AACTTAACGT TATTCGTGGT 
GAATACCTCG ACCCAAGCTT CGCGGTTAAC CTAAGCACGG TGATGGTGTC TGAGTTAGCA 
TTTCTCGTAC ACGAATATCC ACTGTTTTTT TATAAGTCTG CACGCAGTGG CGAGTTTCAA 
TTAGCGGCAT TACTCGGGTT TGAATCTGGC CAAAACCTGT TTTTAGACGG TGGCAAGTGG 
GTGTCTCGCT ATGTGCCATT AGACGTTCAG CGCCGCCCTT TTCAGCTGCA TGTACCAGCT 
CCCCAAAGCA GCGCAGCTCA GAATGTCGAG GGACAGGGCA ACAAGCCCAC CTCTGGGCAC 
TTAGCCATAG ACCCAAGCAG TGCGCAGTTC TCTGCGACTA AGGGGGAGCC ACTCTATAAC 
GGCGATGGCT CGCCAACAGC GACGTTATTG CATTATCAAA CGCTATTTTC TCATTTGCTC 
AGTGCCAGCG AACAGACCCG AAGTGTCATA GCCACACTAG TGGCTCACGA GTTACTCGAA 
GCAGTTGAAC TAAACGTAAC GCTCAAAAAT GGTGACATTA CGCTTAACGA CTTATACGCG 
GTAAATGTAA AAAAACTCAA CGGATTAACC GGCGAAGCTT TGCAAGCGTG CCACAACAAA 
GGCGTGTTGC AAGTATGCCA TTTAGTCATG AGTTCAGGGG CTCACTTAGA AACGATGATA 
GAGCGCGCCA ACACGTAA 

 

Protein sequence

MAQLQLLTSE AHGKLNVIRG EYLDPSFAVN LSTVMVSELA FLVHEYPLFF YKSARSGEFQ 
LAALLGFESG QNLFLDGGKW VSRYVPLDVQ RRPFQLHVPA PQSSAAQNVE GQGNKPTSGH 
LAIDPSSAQF SATKGEPLYN GDGSPTATLL HYQTLFSHLL SASEQTRSVI ATLVAHELLE 
AVELNVTLKN GDITLNDLYA VNVKKLNGLT GEALQACHNK GVLQVCHLVM SSGAHLETMI 
ERANT