Gene Patl_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1929 
Symbol 
ID4172775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2335266 
End bp2335886 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID638054937 
ProductTetR family transcriptional regulator 
Protein accessionYP_661501 
Protein GI109898246 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAG TGTTAACGGA TGAAGAGATA CAGTGTTTTC GCAATCGAAT GTGCGATCAC 
GCCTTGGTTT CATTTGCTAA AAGTGGCGTA GAGGGTATTT CATTGCGCGG ATTAGCCGCT 
GATTTACGTT GCAGTCGCAC TACGCCCTAT CGTTATTTTA AAAACAAGGC TGATATCCTT 
GCAGCGCTGC GCCAGCGTGA ATTTGCACGG ATTGCCGACA CCCTCGAAAA TGCTTTAGCC 
CAAGAGCCAA CCCAAGATAA GCAGCTGAGC GCACTTTGCC ATGCCTATTT TGATTTTGCA 
TTGCAATATC CAGATTCCTA TCGCGTCATG TATAGCGTAG CTCAGCCTGA CTTAAGCAAA 
TATGCAGCTC TTGAACGTGA GATTTTACGT AGTAGCGCGC CGATGCGCCA AGTGGTGAAG 
TCAGCGGTAA GCGCTGGGAT CTTAAAAGGT GACCCAACAG ATATATGTTA TGTAGTTTGG 
GCCGGAGTCC ACGGCTTGAT ATCGTTGCAC TTATCGCACA TGTTGGGTGA ACAACGAGAT 
ATAGCGCAGC TTGCAACCGT CATGATTGAG TCCCTAGTGC GTTCAGTTAG CGTTGCACCC 
GCTTTATCAG TTTCAATTTA G
 
Protein sequence
MPKVLTDEEI QCFRNRMCDH ALVSFAKSGV EGISLRGLAA DLRCSRTTPY RYFKNKADIL 
AALRQREFAR IADTLENALA QEPTQDKQLS ALCHAYFDFA LQYPDSYRVM YSVAQPDLSK 
YAALEREILR SSAPMRQVVK SAVSAGILKG DPTDICYVVW AGVHGLISLH LSHMLGEQRD 
IAQLATVMIE SLVRSVSVAP ALSVSI