Gene Patl_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1898 
Symbol 
ID4172743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2295841 
End bp2296905 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content47% 
IMG OID638054907 
ProductMRP family ATP-binding protein 
Protein accessionYP_661472 
Protein GI109898217 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.121089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTTA GCCGGTCAAC ACCAGAGCAA AAACGTCAGT CATTGGTTTC AAAGCAACTC 
GCGGCGCAAT TCGAACTCAC TGACAAGCAC GTCGGTACAT GGGTGACGGT CTCCGGTGAA
GATGTTCTCA TCACTTTACC TTTTGCTGCC GCAGCCGTTC ATGATGTGCT AGTAGCGCGT
ATTAAAAAAG TAGCGGACGA GCAAAAGCTA CCTATACAGA ACGTAGTCAT CGAAACAGAC
ATTCACGCAT CGCCCACGAA AGTAGCTAAA GTCCCTAACA TTAAAAACAT CATTGCCGTT
GCTTCAGGTA AAGGCGGGGT GGGTAAGTCG ACCACCAGTG TGAACATCGC CTATGCATTG
ATGGCACAAG GGGCAAAAGT GGGGTTATTA GATGCTGACA TTTATGGCCC TTCAATCCCA
ATCATGTTGG GTAATACCGA CTCAACGCCT GCCTCTCGAG ATGATAAAAC CATAATACCC
TTTGCGGCCC ACGGCTTGGT TGCAAGCTCT ATTGGTTATT TTGTGCCAGC TGAGAATGCG
ACAGTGTGGC GAGGGCCGAT GGCCAGTAAA GCCCTTGAAC AATTATTGCG TGAAACCGAC
TGGCCAGAGC TAGATTACTT AATTGTTGAT ATGCCGCCGG GCACGGGGGA CATTCAATTA
ACGCTCGCTC AACAAATGCC AGTCAGTGCT GCTGTGATCG TGACCACCCC ACAAGATTTA
GCGGTAGCAG ATGCCAGAAA AGGCATTGCG ATGTTTAATA AGGTCGATGT GCCGGTGCTG
GGCCTCATTG AAAACATGAG CTTGTACATT TGCCCCAAGT GCGGTCATCA AGAGCATATC
TTTGCTCAAG ACGGCGGAGT GGAATTGGCC AAGCGTAATA AGGTGCCATT ACTTGGCCAA
TTACCATTAA ACATTAAAAT TCGTCAACAT ACCGATGAAG GTACGCCTTT ATTGGTGGCA
GAGCCAAACG ACCCCCTAAG CCACACCTAC CTAAAATGTG CAGCAGCTGT TTCAAAACAG
CTTTATATGA ATGGTTTGAT GGACTTGCGC ATACAAAATA TTTAA
 
Protein sequence
MLFSRSTPEQ KRQSLVSKQL AAQFELTDKH VGTWVTVSGE DVLITLPFAA AAVHDVLVAR 
IKKVADEQKL PIQNVVIETD IHASPTKVAK VPNIKNIIAV ASGKGGVGKS TTSVNIAYAL
MAQGAKVGLL DADIYGPSIP IMLGNTDSTP ASRDDKTIIP FAAHGLVASS IGYFVPAENA
TVWRGPMASK ALEQLLRETD WPELDYLIVD MPPGTGDIQL TLAQQMPVSA AVIVTTPQDL
AVADARKGIA MFNKVDVPVL GLIENMSLYI CPKCGHQEHI FAQDGGVELA KRNKVPLLGQ
LPLNIKIRQH TDEGTPLLVA EPNDPLSHTY LKCAAAVSKQ LYMNGLMDLR IQNI