| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1883 |
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| Symbol | |
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| ID | 4173068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2277778 |
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| End bp | 2278230 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054892 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_661457 |
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| Protein GI | 109898202 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGGC TAGATAAAGA AATTTTAAGG CTATTGCAAG ATGATGCCAC GCTATCTGTT
AACGATATTG CTGAGCGCAT CGGTTTGAGT ACAACGCCTT GTTGGCGGCG TATTCAAAAC
CTAGAAAAAC AGGGGGTGAT TAAGAAACGT GTGGCCTTAT TAGATGCAGA CAAATTAAAC
CTAGGAATGA CCGTCTTTGT GCAAGTCAAA GCCGGGCAAC ATGATATTAA TTGGTTGAGC
CGATTTGCTG AGTACGCCGC CGGAATAGAA GAAATTGTTG AATTTTACCG TATGAGTGGC
GAGTACGACT ATATGCTAAA AGTGGTGGTC GCCGATATGA AGGCCTTCGA CGTCTTTTAT
AAAAAACTGG TAGGGGGCGT TGAGTTGTCG GATGTCACAT CCAGTTTTGC CATGGAACAA
ATTAAGTACA CCACGGCTCT AGCAATTCAA TAG
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| Protein sequence | MDRLDKEILR LLQDDATLSV NDIAERIGLS TTPCWRRIQN LEKQGVIKKR VALLDADKLN
LGMTVFVQVK AGQHDINWLS RFAEYAAGIE EIVEFYRMSG EYDYMLKVVV ADMKAFDVFY
KKLVGGVELS DVTSSFAMEQ IKYTTALAIQ
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